RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 ATRXP46100 2492 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 M0R143 59 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 SNRPCP09234 159 aaKnown RBP15.21■□□□□ 0.03
GDE1-203ENST00000564172 NPSP0C0P6 89 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 HTR2CP28335 458 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 CAV2P51636 162 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 PRSS12P56730 875 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 SCAND1P57086 179 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 FAM3AP98173 230 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 RAB11BQ15907 218 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 UBE2NLQ5JXB2 153 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 C1orf100Q5SVJ3 147 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 PAQR4Q8N4S7 273 aaPredicted RBP15.21■□□□□ 0.03
GDE1-203ENST00000564172 OR51D1Q8NGF3 324 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 PP6455Q8WZ26 134 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 ETV7Q9Y603 341 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 IGKV1-9A0A0C4DH69 117 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 A0A0G2JNJ9 132 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 hCG_38984A0A1B0GV85 526 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 NGFP01138 241 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 ERCC1P07992 297 aaPredicted RBP15.21■□□□□ 0.03
GDE1-203ENST00000564172 CELA3BP08861 270 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 SRSF4Q08170 494 aaKnown RBP15.21■□□□□ 0.03
GDE1-203ENST00000564172 MYPOPQ86VE0 399 aaPredicted RBP15.21■□□□□ 0.03
GDE1-203ENST00000564172 C17orf78Q8N4C9 275 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 FAM3DQ96BQ1 224 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 SLC25A38Q96DW6 304 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 Q9UFV3 132 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 RHBDD3Q9Y3P4 386 aa15.21■□□□□ 0.03
GDE1-203ENST00000564172 RNASEK-C17orf49H0YIS7 233 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 NDUFS8O00217 210 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 SFTA3P0C7M3 94 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 OPRM1P35372 400 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 WNT5AP41221 380 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 GSK3AP49840 483 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 IDH3GP51553 393 aaPredicted RBP15.2■□□□□ 0.02
GDE1-203ENST00000564172 NAAAQ02083 359 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 LY6DQ14210 128 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 C2orf76Q3KRA6 126 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 SCGB2B2Q4G0G5 96 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 ACOT7LQ6ZUV0 252 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 BHLHA15Q7RTS1 189 aaPredicted RBP15.2■□□□□ 0.02
GDE1-203ENST00000564172 CMTM4Q8IZR5 234 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 OR4K15Q8NH41 348 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 NEK7Q8TDX7 302 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 TRDCB7Z8K6 153 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 GABARAPH6UMI1 98 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 GOSR2O14653 212 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 MSTNO14793 375 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 CD5P06127 495 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 DAOP14920 347 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 BMP5P22003 454 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 OR8B8Q15620 311 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 UBE2V2Q15819 145 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 TBC1D28Q2M2D7 210 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 DMRTC1Q5HYR2 192 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 ZNF101Q8IZC7 436 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 OR4D6Q8NGJ1 314 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 RRNAD1Q96FB5 475 aaKnown RBP15.2■□□□□ 0.02
GDE1-203ENST00000564172 CNTD2Q9H8S5 307 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 DOK5Q9P104 306 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 STARD10Q9Y365 291 aa15.2■□□□□ 0.02
GDE1-203ENST00000564172 A0A1W2PPH5 198 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 IGKV3-15P01624 115 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 ZNF93P35789 620 aaPredicted RBP15.19■□□□□ 0.02
GDE1-203ENST00000564172 C2orf68Q2NKX9 166 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 RNF144BQ7Z419 303 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 OR51S1Q8NGJ8 323 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 TERB2Q8NHR7 220 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 SYNPRQ8TBG9 265 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 SAT2Q96F10 170 aaPredicted RBP15.19■□□□□ 0.02
GDE1-203ENST00000564172 SPACA5Q96QH8 159 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 REPIN1Q9BWE0 567 aaKnown RBP15.19■□□□□ 0.02
GDE1-203ENST00000564172 SNHG12Q9BXW3 62 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 RHOFQ9HBH0 211 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 hCG_1809904A0A1W2PP81 198 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 A0A1W2PR64 198 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 A0A1W2PRV1 198 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 ANKRD20A5PA0PJZ0 165 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 OR5H1A6NKK0 313 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 AGFG2O95081 481 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 CD74P04233 296 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 HNF1AP20823 631 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 RNASE12Q5GAN4 147 aaKnown RBP15.19■□□□□ 0.02
GDE1-203ENST00000564172 DCAF12L2Q5VW00 463 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 OBP2BQ9NPH6 170 aa15.19■□□□□ 0.02
GDE1-203ENST00000564172 LOC100289279A0A1B0GTE1 492 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 A0A1W2PN81 502 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 DIRAS3O95661 229 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 SFTPBP07988 381 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 CHRNA7P36544 502 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 NDUFA6P56556 154 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 MALLQ13021 153 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 HAGHQ16775 308 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 CHRFAM7AQ494W8 412 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 SSC4DQ8WTU2 575 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 RAB40AQ8WXH6 277 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 KCNK15Q9H427 330 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 FBXO7Q9Y3I1 522 aa15.18■□□□□ 0.02
GDE1-203ENST00000564172 C7orf77A4D0Y5 90 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms