RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 OR13C5Q8NGS8 318 aa14.19□□□□□ -0.14
NME3-205ENST00000563854 KIF25Q9UIL4 384 aa14.19□□□□□ -0.14
NME3-205ENST00000563854 IRGMA1A4Y4 181 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 LEUTXA8MZ59 168 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 CDRT1O95170 752 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 IGHV3-7P01780 117 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 DCKP27707 260 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 BRS3P32247 399 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 CEACAM3P40198 252 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 C17orf58Q2M2W7 97 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 UTF1Q5T230 341 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 DDI2Q5TDH0 399 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 OR13A1Q8NGR1 328 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 ORAI1Q96D31 301 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 CALYQ9NYX4 217 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 ING4Q9UNL4 249 aa14.18□□□□□ -0.14
NME3-205ENST00000563854 TRAV24A0A0B4J272 114 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 FAM90A22PA8MWA6 464 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 G3V4G9 280 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 IGLV1-47P01700 117 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 OPN1MWP04001 364 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 ALDOBP05062 364 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 OPN1MW2P0DN77 364 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 OPN1MW3P0DN78 364 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 PRRX1P54821 245 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 IL13RA2Q14627 380 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 HLA-DRB5Q30154 266 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 CCDC58Q4VC31 144 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 TPTE2P1Q5T6R2 138 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 ELP2Q6IA86 826 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 ZNF529Q6P280 563 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 ZFP41Q8N8Y5 198 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 OR51T1Q8NGJ9 327 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 MRGPRDQ8TDS7 321 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 LEAP2Q969E1 77 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 AKR1E2Q96JD6 320 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 CITED2Q99967 270 aaPredicted RBP14.17□□□□□ -0.14
NME3-205ENST00000563854 SLC25A33Q9BSK2 321 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 CHCHD3Q9NX63 227 aaKnown RBP14.17□□□□□ -0.14
NME3-205ENST00000563854 CLEC2DQ9UHP7 191 aa14.17□□□□□ -0.14
NME3-205ENST00000563854 EXOSC1Q9Y3B2 195 aaKnown RBP14.17□□□□□ -0.14
NME3-205ENST00000563854 SIRT4Q9Y6E7 314 aaPredicted RBP14.17□□□□□ -0.14
NME3-205ENST00000563854 TRAV39A0A0B4J263 110 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 KBTBD11-OT1A0A1B0GTJ5 212 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 A0A1W2PRX2 142 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 BUB1B-PAK6H3BSN5 160 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 CSTBP04080 98 aaKnown RBP14.16□□□□□ -0.14
NME3-205ENST00000563854 SERPINA2P20848 420 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 CD34P28906 385 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 GNG10P50151 68 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 MED21Q13503 144 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 FBLN7Q53RD9 439 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 KIAA2026Q5HYC2 2103 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 TTC23Q5W5X9 447 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 ZNF565Q8N9K5 539 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 SETD9Q8NE22 299 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 PLPPR1Q8TBJ4 325 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 R3HDM4Q96D70 268 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 SMIM19Q96E16 107 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 KIRREL1Q96J84 757 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 S100A13Q99584 98 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 BARHL1Q9BZE3 327 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 METTL9Q9H1A3 318 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 TMEM138Q9NPI0 162 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 BABAM2Q9NXR7 383 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 ZNF581Q9P0T4 197 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 DIMT1Q9UNQ2 313 aaKnown RBP14.16□□□□□ -0.14
NME3-205ENST00000563854 ZNF281Q9Y2X9 895 aa14.16□□□□□ -0.14
NME3-205ENST00000563854 PNMA8CA0A1B0GUJ8 204 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 SH2D7A6NKC9 451 aaPredicted RBP14.15□□□□□ -0.14
NME3-205ENST00000563854 OR7C1O76099 320 aaPredicted RBP14.15□□□□□ -0.14
NME3-205ENST00000563854 LALBAP00709 142 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 C21orf33P30042 268 aaPredicted RBP14.15□□□□□ -0.14
NME3-205ENST00000563854 BDKRB2P30411 391 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 ZNF93P35789 620 aaPredicted RBP14.15□□□□□ -0.14
NME3-205ENST00000563854 MNDAP41218 407 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 RCN1Q15293 331 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 ABCA11PQ4W5N1 156 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 C16orf82Q7Z2V1 217 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 NDUFA11Q86Y39 141 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 OSR2Q8N2R0 312 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 DHRSXQ8N5I4 330 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 OR9G1Q8NH87 305 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 RFESDQ8TAC1 157 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 TOMM40LQ969M1 308 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 RPEQ96AT9 228 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 CREB3L1Q96BA8 519 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 TMEM80Q96HE8 168 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 WNT10AQ9GZT5 417 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 MMP28Q9H239 520 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 LIN7BQ9HAP6 207 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 IDI2-AS1Q9NZ38 188 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 ST3GAL6Q9Y274 331 aa14.15□□□□□ -0.14
NME3-205ENST00000563854 TGP01266 2768 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 IL1AP01583 271 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 LPLP06858 475 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 SSTR5P35346 364 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 RIPK1Q13546 671 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 C9orf152Q5JTZ5 239 aa14.14□□□□□ -0.15
NME3-205ENST00000563854 RSBN1Q5VWQ0 802 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms