RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CKLFQ9UBR5 152 aa4.34□□□□□ -1.71
HERPUD1-207ENST00000563781 PPP1R3CQ9UQK1 317 aa4.34□□□□□ -1.71
HERPUD1-207ENST00000563781 GSTK1Q9Y2Q3 226 aa4.34□□□□□ -1.71
HERPUD1-207ENST00000563781 AK6Q9Y3D8 172 aaKnown RBP4.34□□□□□ -1.71
HERPUD1-207ENST00000563781 DNHD1Q96M86 4753 aa4.34□□□□□ -1.72
HERPUD1-207ENST00000563781 DSCAMO60469 2012 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 IGHV4-30-2A0A087WSY4 118 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 A0A1W2PP11 408 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 VWC2LB2RUY7 222 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 CLDN25C9JDP6 229 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 H3BMQ9 156 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 LGALS8O00214 317 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 SLC17A2O00624 439 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 TNFRSF13BO14836 293 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 SLC22A1O15245 554 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 AKR7A2O43488 359 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 TRIAP1O43715 76 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 KDM4BO94953 1096 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 CDRT1O95170 752 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 PAHP00439 452 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 IGHV2-70P01814 119 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 HEXAP06865 529 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 SFTPBP07988 381 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 OCMP0CE72 109 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 TMEM11P17152 192 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 RAB3BP20337 219 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 GIFP27352 417 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 ZNF93P35789 620 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 PDLIM4P50479 330 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 TMBIM6P55061 237 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 TMEM33P57088 247 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 QRFPP83859 136 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 MXD1Q05195 221 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 DYRK1AQ13627 763 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 ZNF273Q14593 569 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 SPCS2Q15005 226 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 ZMYND11Q15326 602 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 TEX36Q5VZQ5 186 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 PRSS57Q6UWY2 283 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 TPRA1Q86W33 373 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 SAXO1Q8IYX7 474 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 BATF2Q8N1L9 274 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 JAGN1Q8N5M9 183 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 C19orf18Q8NEA5 215 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 OR11L1Q8NGX0 322 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 IL17DQ8TAD2 202 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 NDNFQ8TB73 568 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 RAB2BQ8WUD1 216 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 TNFAIP8L1Q8WVP5 186 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 CCL17Q92583 94 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 SLAMF9Q96A28 289 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 CEP19Q96LK0 163 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 FOXC2Q99958 501 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 BCL7BQ9BQE9 202 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 UQCC2Q9BRT2 126 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 BARHL1Q9BZE3 327 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 BPESC1Q9GZL8 116 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 WDR13Q9H1Z4 485 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 KCNK15Q9H427 330 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 MYOZ1Q9NP98 299 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 RBFOX1Q9NWB1 397 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 IL36GQ9NZH8 169 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 RNF7Q9UBF6 113 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 IL36RNQ9UBH0 155 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 MRPS28Q9Y2Q9 187 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 POLDIP2Q9Y2S7 368 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 WIPI2Q9Y4P8 454 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 NPTNQ9Y639 398 aa4.33□□□□□ -1.72
HERPUD1-207ENST00000563781 ARID1AO14497 2285 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 IGKV1D-17A0A075B6S4 117 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 PPIAL4EA0A075B759 164 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 IGHV3OR15-7A0A075B7D8 119 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 IGHV4-61A0A0C4DH41 118 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 SMIM31A0A1B0GVY4 71 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 A0A1B0GW55 424 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 DPPA5A6NC42 116 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 OOEPA6NGQ2 149 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 LRRC30A6NM36 301 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 IFITM5A6NNB3 132 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 TMEM14DPA8MWL7 114 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 USP17L23D6RBM5 183 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 PPIAL4DF5H284 164 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 TRAPPC2LH3BP13 241 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 AIPO00170 330 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 NDUFS8O00217 210 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 PDCD5O14737 125 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 MAGEB3O15480 346 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 PPIHO43447 177 aaKnown RBP4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 FCN3O75636 299 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 NXPH2O95156 264 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 FSTL3O95633 263 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 IL1AP01583 271 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 TFF1P04155 84 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 CSF3P09919 207 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 DUX4L2P0CJ85 424 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 DUX4L3P0CJ86 424 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 DUX4L4P0CJ87 422 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 DUX4L5P0CJ88 424 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 DUX4L6P0CJ89 424 aa4.32□□□□□ -1.72
HERPUD1-207ENST00000563781 DUX4L7P0CJ90 424 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms