RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 DUX4L6P0CJ89 424 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 DUX4L7P0CJ90 424 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 SPNP16150 400 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 DTYMKP23919 212 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 MDH2P40926 338 aaKnown RBP8.49□□□□□ -1.05
SMG1-208ENST00000563448 AP3S2P59780 193 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 DUX4L9Q6RFH8 374 aaPredicted RBP8.49□□□□□ -1.05
SMG1-208ENST00000563448 OR4D10Q8NGI6 311 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 OR4C16Q8NGL9 310 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 SDSLQ96GA7 329 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 PSMG3-AS1Q96PY0 264 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 CCL13Q99616 98 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 C7orf50Q9BRJ6 194 aaKnown RBP8.49□□□□□ -1.05
SMG1-208ENST00000563448 C12orf4Q9NQ89 552 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 DUX4Q9UBX2 424 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 DCHS2Q6V1P9 2916 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 TRBV6-6A0A0A6YYG2 114 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
SMG1-208ENST00000563448 AKAIN1P0CW23 69 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 DAOP14920 347 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 MRPS11P82912 194 aaKnown RBP8.48□□□□□ -1.05
SMG1-208ENST00000563448 OXA1LQ15070 435 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 ZMYND11Q15326 602 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 ATPAF1Q5TC12 328 aaPredicted RBP8.48□□□□□ -1.05
SMG1-208ENST00000563448 RSBN1Q5VWQ0 802 aaPredicted RBP8.48□□□□□ -1.05
SMG1-208ENST00000563448 STEAP1BQ6NZ63 245 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 ZNF497Q6ZNH5 498 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 ZNF788Q6ZQV5 615 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 NRARPQ7Z6K4 114 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 GLCCI1Q86VQ1 547 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 GAPTQ8N292 157 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 CENPSQ8N2Z9 138 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 ZNF561Q8N587 486 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 ASCC1Q8N9N2 400 aaKnown RBP8.48□□□□□ -1.05
SMG1-208ENST00000563448 ZNRF1Q8ND25 227 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 BEST4Q8NFU0 473 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 OR4K15Q8NH41 348 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 CHPT1Q8WUD6 406 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 C14orf79Q96F83 325 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 SNX22Q96L94 193 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 TINAGL1Q9GZM7 467 aaPredicted RBP8.48□□□□□ -1.05
SMG1-208ENST00000563448 LIME1Q9H400 295 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 OCEL1Q9H607 264 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 ZNF665Q9H7R5 613 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 CHMP1AQ9HD42 196 aaPredicted RBP8.48□□□□□ -1.05
SMG1-208ENST00000563448 DLL4Q9NR61 685 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 ING3Q9NXR8 418 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 PAIP2BQ9ULR5 123 aaKnown RBP8.48□□□□□ -1.05
SMG1-208ENST00000563448 AKAP6Q13023 2319 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 LRRK2Q5S007 2527 aa8.48□□□□□ -1.05
SMG1-208ENST00000563448 CENPXA8MT69 81 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 ZNF736B4DX44 427 aaPredicted RBP8.47□□□□□ -1.05
SMG1-208ENST00000563448 K7N7A8 449 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 M0QYG6 137 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 PTTG1O95997 202 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 SELLP14151 372 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 BTG1P62324 171 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 MZT2BQ6NZ67 158 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 ZNF880Q6PDB4 577 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 LYPD2Q6UXB3 125 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 C5orf24Q7Z6I8 188 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 DEDD2Q8WXF8 326 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 COQ2Q96H96 371 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 CCL19Q99731 98 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 TMEM246Q9BRR3 403 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 RIMS4Q9H426 269 aaPredicted RBP8.47□□□□□ -1.05
SMG1-208ENST00000563448 Q9N2K0 584 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 EDARQ9UNE0 448 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 COL12A1Q99715 3063 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 NAP1L6A6NFF2 107 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 RAB3DO95716 219 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 IGHV2-70P01814 119 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 PMP2P02689 132 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 TK1P04183 234 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 CSN2P05814 226 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 ZNF735P0CB33 412 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 HRH1P35367 487 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 KCNJ3P48549 501 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 EFNA4P52798 201 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 AESQ08117 197 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 GRK1Q15835 563 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 SRSF7Q16629 238 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMG1-208ENST00000563448 SLC35E4Q6ICL7 350 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 FAM216BQ8N7L0 139 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 CCDC107Q8WV48 283 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 NRGNQ92686 78 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 DNTTIP1Q9H147 329 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 MYOZ1Q9NP98 299 aaPredicted RBP8.47□□□□□ -1.05
SMG1-208ENST00000563448 ANXA10Q9UJ72 324 aa8.47□□□□□ -1.05
SMG1-208ENST00000563448 TRAV39A0A0B4J263 110 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 SIGLEC5O15389 551 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 FCN3O75636 299 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 FSTL3O95633 263 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 SLC6A1P30531 599 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 CCR6P51684 374 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 PAX5Q02548 391 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 TRIM16LQ309B1 348 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 AVPI1Q5T686 147 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 Q6ZS49 121 aa8.46□□□□□ -1.05
SMG1-208ENST00000563448 FGFRL1Q8N441 504 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms