RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 NCR3LG1Q68D85 454 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 AWAT2Q6E213 333 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 SIGIRRQ6IA17 410 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 OR10K2Q6IF99 312 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 BRICD5Q6PL45 260 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 BAIAP2L2Q6UXY1 529 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 Q6YL49 198 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 ZNF782Q6ZMW2 699 aaPredicted RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 SUMF2Q8NBJ7 301 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 PPP1R35Q8TAP8 253 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 ZFAND2BQ8WV99 257 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 C17orf50Q8WW18 174 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 TMEM158Q8WZ71 300 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 MRPS24Q96EL2 167 aaKnown RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 Q96M66 194 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 ZNF714Q96N38 554 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 DUX5Q96PT3 197 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 C19orf24Q9BVV8 132 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 KCNK15Q9H427 330 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 NCOR1P1Q9H4R4 102 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 BANF2Q9H503 90 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 RCC2Q9P258 522 aaKnown RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 UBE2J1Q9Y385 318 aaPredicted RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 AK6Q9Y3D8 172 aaKnown RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 A0A1W2PPH5 198 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 TMEM14DPA8MWL7 114 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 ODF3BA8MYP8 253 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 CLDN34H7C241 214 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 CCRL2O00421 344 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 SLC17A2O00624 439 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 HOXA3O43365 443 aaPredicted RBP6.95□□□□□ -1.3
UBR1-204ENST00000563239 ARL6IP5O75915 188 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 OR7C1O76099 320 aaPredicted RBP6.95□□□□□ -1.3
UBR1-204ENST00000563239 CSTBP04080 98 aaKnown RBP6.95□□□□□ -1.3
UBR1-204ENST00000563239 MGMTP16455 207 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 GALP22466 123 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 COX7A1P24310 79 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 CALRP27797 417 aaKnown RBP6.95□□□□□ -1.3
UBR1-204ENST00000563239 PSMB9P28065 219 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 SAA4P35542 130 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 BAMBIQ13145 260 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 UNC119Q13432 240 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 GPR176Q14439 515 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 MPV17LQ2QL34 196 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 KRBOX4Q5JUW0 171 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 GLT8D1Q68CQ7 371 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 LINC00596Q86U02 117 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 NR2C2APQ86WQ0 139 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 LDLRAD3Q86YD5 345 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 OR13A1Q8NGR1 328 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 FAM216AQ8WUB2 273 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 FCGR1BQ92637 280 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 FOXRED1Q96CU9 486 aaPredicted RBP6.95□□□□□ -1.3
UBR1-204ENST00000563239 JMJD8Q96S16 334 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 S100A13Q99584 98 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 DPCDQ9BVM2 203 aaPredicted RBP6.95□□□□□ -1.3
UBR1-204ENST00000563239 SELENOIQ9C0D9 397 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 HEXA-AS1Q9H8Q6 139 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 LINC00574Q9H8X3 128 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 ING3Q9NXR8 418 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 GHRLQ9UBU3 117 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 KIF25Q9UIL4 384 aa6.95□□□□□ -1.3
UBR1-204ENST00000563239 TRGV10A0A0A0MS01 117 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 A0A0A6YYD4 124 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 TRAV1-2A0A0B4J238 106 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 TRAV39A0A0B4J263 110 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 MEIOCA2RUB1 952 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A10PA6NDY2 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A18PA6NE21 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A16PA6NEW6 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A20PA6NIJ5 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A8PA6NJQ4 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A7PA6NKC0 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 TRIM64CA6NLI5 447 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A22PA8MWA6 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A12PA8MX19 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A5PA8MXJ8 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A23PA8MXZ1 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 CRTAPO75718 401 aaPredicted RBP6.94□□□□□ -1.3
UBR1-204ENST00000563239 IGHV4-59P01825 116 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 RNASE1P07998 156 aaKnown RBP6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A15PP0C7V4 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A13PP0C7W8 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A14PP0C7W9 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM90A24PP0C7X0 464 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 UBBP0CG47 229 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 PAX6P26367 422 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 HTR2CP28335 458 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 FGF9P31371 208 aaPredicted RBP6.94□□□□□ -1.3
UBR1-204ENST00000563239 IER3P46695 156 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 KCNJ3P48549 501 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 OR10A3P58181 314 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 RPS27AP62979 156 aaKnown RBP6.94□□□□□ -1.3
UBR1-204ENST00000563239 PLA2G7Q13093 441 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 P2RY14Q15391 338 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 MIDNQ504T8 468 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 PRAMEF5Q5TYX0 476 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 C22orf42Q6IC83 251 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 SLC35E4Q6ICL7 350 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms