RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 UPK2O00526 184 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 FFAR1O14842 300 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 DENRO43583 198 aaKnown RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 COX7A2P2O60397 106 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 RPP14O95059 124 aaKnown RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 AHSA1O95433 338 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 RAB36O95755 333 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 IGKV2D-28P01615 120 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 APOEP02649 317 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 HMGN1P05114 100 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 IL6P05231 212 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 SOD3P08294 240 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 NELFEP18615 380 aaKnown RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 NTF3P20783 257 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 PSMB6P28072 239 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 IMPA1P29218 277 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 GTF2H1P32780 548 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 CEBPGP53567 150 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 MRPS25P82663 173 aaKnown RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF816Q0VGE8 651 aaPredicted RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 BTN1A1Q13410 526 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 EIF4EBP1Q13541 118 aaPredicted RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 MOBPQ13875 183 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 SP6Q3SY56 376 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 DNAL1Q4LDG9 190 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 ATP6AP1LQ52LC2 224 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 CLEC12AQ5QGZ9 265 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 RBM48Q5RL73 367 aaKnown RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 ELP2Q6IA86 826 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC25A34Q6PIV7 304 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 SSX7Q7RTT5 188 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 DCXRQ7Z4W1 244 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 MRPL52Q86TS9 123 aaKnown RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 MARCH3Q86UD3 253 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 C10orf67Q8IYJ2 551 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 OSR2Q8N2R0 312 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 CCDC112Q8NEF3 446 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC26A10Q8NG04 563 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 OR5H2Q8NGV7 314 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 UBA3Q8TBC4 463 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 FAM45AQ8TCE6 357 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 DYNC2LI1Q8TCX1 351 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 PHF10Q8WUB8 498 aaKnown RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 ITLN2Q8WWU7 325 aaPredicted RBP1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 DDIT4LQ96D03 193 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 PPP1R36Q96LQ0 422 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 BIRC8Q96P09 236 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 PITX2Q99697 317 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 DCUN1D5Q9BTE7 237 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 LHX5Q9H2C1 402 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 OR51V1Q9H2C8 321 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 CYTL1Q9NRR1 136 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 TMEM38BQ9NVV0 291 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 C1orf109Q9NX04 203 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 PTPRTO14522 1441 aa1.9□□□□□ -2.11
SHCBP1-202ENST00000563219 ANKRD30AQ9BXX3 1397 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 KIF26AQ9ULI4 1882 aaPredicted RBP1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 IGLV4-60A0A075B6I1 120 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 A0A0A6YYH2 397 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 TRAV8-3A0A0A6YYJ7 113 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 TRAV8-2A0A0B4J237 113 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 TMEM150BA6NC51 233 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 LRCOL1A6NCL2 159 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 A6NJ64 397 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF233A6NK53 670 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 SMIM23A6NLE4 172 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 I3L4J1 428 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 UPK1AO00322 258 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 GYG2O15488 501 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 ATP8B1O43520 1251 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 SMIM24O75264 130 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 RBBP9O75884 186 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 CDRT1O95170 752 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 SCGB1C2P0DMR2 95 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 PRTN3P24158 256 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC6A1P30531 599 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 ADORA1P30542 326 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 ACTR1BP42025 376 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 SULT1A2P50226 295 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 RAP1GDS1P52306 607 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 CLDN12P56749 244 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 RAB8AP61006 207 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 RAB4BP61018 213 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 GLO1Q04760 184 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 BAXQ07812 192 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF616Q08AN1 781 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 CLLU1OSQ5K130 101 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 CLEC6AQ6EIG7 209 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 PRSS54Q6PEW0 395 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 UNQ9165/PRO28630Q6UXU0 137 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 CCDC121Q6ZUS5 278 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 TBC1D19Q8N5T2 526 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 SCGB1C1Q8TD33 95 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 RTN4IP1Q8WWV3 396 aaPredicted RBP1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 RORBQ92753 470 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 LINC00477Q96M19 166 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 YPEL4Q96NS1 127 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 SUCNR1Q9BXA5 334 aa1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 C6orf62Q9GZU0 229 aaPredicted RBP1.89□□□□□ -2.11
SHCBP1-202ENST00000563219 METTL8Q9H825 291 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms