RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 HCP5Q6MZN7 132 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 GLIPR1L1Q6UWM5 242 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 GDPD3Q7L5L3 318 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 VMO1Q7Z5L0 202 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 LINC00596Q86U02 117 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 CMTM4Q8IZR5 234 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 BCL6BQ8N143 479 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 OSR2Q8N2R0 312 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 OR4M1Q8NGD0 313 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 PPP1R35Q8TAP8 253 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 TRIM63Q969Q1 353 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 CHST6Q9GZX3 395 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 PCDHB16Q9NRJ7 776 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 GHRLQ9UBU3 117 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 ING4Q9UNL4 249 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 ST3GAL6Q9Y274 331 aa5.07□□□□□ -1.6
CNOT1-204ENST00000563130 MRPS28Q9Y2Q9 187 aaKnown RBP5.07□□□□□ -1.6
CNOT1-204ENST00000563130 IGHV3OR16-10A0A075B7F0 116 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 RNASEK-C17orf49H0YIS7 233 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 GEMIN2O14893 280 aaKnown RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 DEGS1O15121 323 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 SLC22A1O15245 554 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 TNFAIP8O95379 198 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 RBP4P02753 201 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 CSTBP04080 98 aaKnown RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 CCL3L1P16619 93 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 SERPINA2P20848 420 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 GABRR1P24046 479 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FPR2P25090 351 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 CFPP27918 469 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 PSMB9P28065 219 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FGF9P31371 208 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 P2RX3P56373 397 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 EDDM3BP56851 147 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 HILS1P60008 231 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 MPV17LQ2QL34 196 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 GPR157Q5UAW9 335 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 AWAT2Q6E213 333 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 BRD3OSQ6XYD6 125 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM185AQ8N0U4 392 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 TPRX1Q8N7U7 411 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 TMEM104Q8NE00 496 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 C22orf15Q8WYQ4 148 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 SLC25A28Q96A46 364 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 COQ2Q96H96 371 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF48Q96MX3 618 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 S100A13Q99584 98 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 SLC6A7Q99884 636 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 PPA2Q9H2U2 334 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 NCOR1P1Q9H4R4 102 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF696Q9H7X3 374 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 SIRT7Q9NRC8 400 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF581Q9P0T4 197 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 RCC2Q9P258 522 aaKnown RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 ONECUT1Q9UBC0 465 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 LINC00312Q9Y6C7 94 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 DSCAML1Q8TD84 2053 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 ATRQ13535 2644 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 TRAV1-2A0A0B4J238 106 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 IGHV1-69DA0A0B4J2H0 117 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 A0A1W2PPH5 198 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 hADV38S2A0JD32 116 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A10PA6NDY2 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A18PA6NE21 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A16PA6NEW6 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A20PA6NIJ5 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A8PA6NJQ4 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A7PA6NKC0 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A22PA8MWA6 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A12PA8MX19 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A5PA8MXJ8 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A23PA8MXZ1 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 TCF21O43680 179 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 IGHV1-69P01742 117 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A15PP0C7V4 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A13PP0C7W8 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A14PP0C7W9 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FAM90A24PP0C7X0 464 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 UBBP0CG47 229 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF728P0DKX0 622 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 HTR2CP28335 458 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 KCNJ3P48549 501 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 DLX1P56177 255 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 QRFPP83859 136 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 AESQ08117 197 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 TAF9Q16594 264 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 OR6M1Q8NGM8 313 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 ZNF418Q8TF45 676 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 CORO2AQ92828 525 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 LHX4Q969G2 390 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 Q96M66 194 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 NR1H4Q96RI1 486 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 MS4A7Q9GZW8 240 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 SLITRK2Q9H156 845 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 ADAM30Q9UKF2 790 aa5.06□□□□□ -1.6
CNOT1-204ENST00000563130 AK6Q9Y3D8 172 aaKnown RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 SOX21Q9Y651 276 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-204ENST00000563130 FBN1P35555 2871 aaKnown RBP5.05□□□□□ -1.6
CNOT1-204ENST00000563130 A0A087WXM4 84 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms