RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ST3GAL6Q9Y274 331 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 RBM7Q9Y580 266 aaKnown RBP16.2■□□□□ 0.18
RAB40C-206ENST00000561781 CFAP54Q96N23 3096 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 SOCS1O15524 211 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 WDR1O75083 606 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 RAD51DO75771 328 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 IL33O95760 270 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 GPR75O95800 540 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 DBHP09172 617 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 ASCL1P50553 236 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 SNU13P55769 128 aaKnown RBP16.2■□□□□ 0.18
RAB40C-206ENST00000561781 NNATQ16517 81 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 PRSS41Q7RTY9 318 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 OR4C3Q8NH37 302 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 RPUSD4Q96CM3 377 aaKnown RBP16.2■□□□□ 0.18
RAB40C-206ENST00000561781 AGMATQ9BSE5 352 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 ST6GALNAC5Q9BVH7 336 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 ZNF581Q9P0T4 197 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 DOCK9Q9BZ29 2069 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 METTL12A8MUP2 240 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 SRSF10O75494 262 aaKnown RBP16.19■□□□□ 0.18
RAB40C-206ENST00000561781 SMIM10L1P0DMW3 83 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 RPS15AP62244 130 aaKnown RBP16.19■□□□□ 0.18
RAB40C-206ENST00000561781 BSXQ3C1V8 233 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 AGBL4Q5VU57 503 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 CYP2G1PQ6ZSU1 146 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 NT5CQ8TCD5 201 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 SMIM10Q96HG1 83 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 RASL10BQ96S79 203 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 ADOQ96SZ5 270 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 G6PC2Q9NQR9 355 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 LRIT1Q9P2V4 623 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 R4GMQ9 66 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 KNL1Q8NG31 2342 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 ZFP92A6NM28 416 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 P2RY10O00398 339 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 TRAPPC6AO75865 159 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 CD46P15529 392 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 APOBEC3AP31941 199 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-206ENST00000561781 SRP14P37108 136 aaKnown RBP16.19■□□□□ 0.18
RAB40C-206ENST00000561781 Q6ZWC4 215 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 GATSQ8NAP1 163 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 HOXB13Q92826 284 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-206ENST00000561781 VN1R1Q9GZP7 353 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 TUBG2Q9NRH3 451 aa16.19■□□□□ 0.18
RAB40C-206ENST00000561781 ZNF701Q9NV72 531 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-206ENST00000561781 SERINC4A6NH21 518 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 EFNA3P52797 238 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 ARL6IP1Q15041 203 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 ATG4DQ86TL0 474 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-206ENST00000561781 OR14C36Q8NHC7 312 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 ANAPC16Q96DE5 110 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 OR51I2Q9H344 312 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 CST9LQ9H4G1 147 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 C11orf98E9PRG8 122 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 FOXS1O43638 330 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 SLC16A7O60669 478 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 FGF8P55075 233 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-206ENST00000561781 LCN2P80188 198 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 LPAL2Q16609 132 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 TMEM41BQ5BJD5 291 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 VN1R17PQ8TDU5 208 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 ZNF845Q96IR2 970 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-206ENST00000561781 BTF3L4Q96K17 158 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 SLC2A9Q9NRM0 540 aa16.18■□□□□ 0.18
RAB40C-206ENST00000561781 KMT2EQ8IZD2 1858 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 PRR33A8MZF0 331 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 CYR61O00622 381 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 LILRA1O75019 489 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 NBEAP1P0C6P0 100 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 HNRNPA3P51991 378 aaKnown RBP16.17■□□□□ 0.18
RAB40C-206ENST00000561781 LDLRAD2Q5SZI1 272 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 FBXO42Q6P3S6 717 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 RNF144BQ7Z419 303 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 LGI3Q8N145 548 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 D2HGDHQ8N465 521 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 LRTM2Q8N967 370 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 OR52N5Q8NH56 324 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 MMP23AO75900 390 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 PNMTP11086 282 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 TMEM52BQ4KMG9 183 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 KCNIP4Q6PIL6 250 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 APH1AQ96BI3 265 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 SMIM7Q9BQ49 75 aa16.17■□□□□ 0.18
RAB40C-206ENST00000561781 LMF2Q9BU23 707 aaKnown RBP16.17■□□□□ 0.18
RAB40C-206ENST00000561781 DMXL1Q9Y485 3027 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 NUPR1O60356 82 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 MPIG6BO95866 241 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 TMEM50BP56557 158 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 WBP2NLQ6ICG8 309 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 OR52M1Q8NGK5 317 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 KCNG3Q8TAE7 436 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 SPACA5Q96QH8 159 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 TXN2Q99757 166 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 OR10A5Q9H207 317 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 PLEKHF2Q9H8W4 249 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 BET1LQ9NYM9 111 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 FAM24AA6NFZ4 105 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 RNF212BA8MTL3 300 aa16.16■□□□□ 0.18
RAB40C-206ENST00000561781 NPIPA2E9PIF3 369 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms