RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 MRPS2Q9Y399 296 aaKnown RBP6.31□□□□□ -1.4
CDH1-203ENST00000561751 RNF115Q9Y4L5 304 aa6.31□□□□□ -1.4
CDH1-203ENST00000561751 TBL2Q9Y4P3 447 aaKnown RBP6.31□□□□□ -1.4
CDH1-203ENST00000561751 LRP12Q9Y561 859 aa6.31□□□□□ -1.4
CDH1-203ENST00000561751 TRAPPC1Q9Y5R8 145 aa6.31□□□□□ -1.4
CDH1-203ENST00000561751 PRRC2BQ5JSZ5 2229 aaKnown RBP6.31□□□□□ -1.4
CDH1-203ENST00000561751 SCN5AQ14524 2016 aa6.31□□□□□ -1.4
CDH1-203ENST00000561751 TCF20Q9UGU0 1960 aaKnown RBP6.31□□□□□ -1.4
CDH1-203ENST00000561751 ANAPC1Q9H1A4 1944 aa6.31□□□□□ -1.4
CDH1-203ENST00000561751 BRWD1Q9NSI6 2320 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 TMEM202A6NGA9 273 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 SERINC4A6NH21 518 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 G3V4G9 280 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 TRAPPC2LH3BP13 241 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 TMPRSS2O15393 492 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 COCHO43405 550 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 TRAF3IP2O43734 574 aaPredicted RBP6.3□□□□□ -1.4
CDH1-203ENST00000561751 NPIPB7O75200 414 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 HYPMO75409 117 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 C1QL1O75973 258 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 DDAH2O95865 285 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 EOMESO95936 686 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 NGFRP08138 427 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 SLC35E2P0CK97 266 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 SLC25A6P12236 298 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 REG1BP48304 166 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 TFPI2P48307 235 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 CDC34P49427 236 aaPredicted RBP6.3□□□□□ -1.4
CDH1-203ENST00000561751 COMPP49747 757 aaPredicted RBP6.3□□□□□ -1.4
CDH1-203ENST00000561751 PRRX1P54821 245 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 RPL23P62829 140 aaKnown RBP6.3□□□□□ -1.4
CDH1-203ENST00000561751 GNB2P62879 340 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 DEFB103AP81534 67 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 PRDX1Q06830 199 aaKnown RBP6.3□□□□□ -1.4
CDH1-203ENST00000561751 SCGB2A2Q13296 93 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 ZNF74Q16587 644 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 ITPRIPL2Q3MIP1 535 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 C1QL3Q5VWW1 255 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 ZNF793Q6ZN11 406 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 Q6ZN92 141 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 COLCA1Q6ZS62 124 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 Q6ZWC4 215 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 MUC15Q8N387 334 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 TMEM252Q8N6L7 170 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 TMEM217Q8N7C4 229 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 CCDC71LQ8N9Z2 235 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 LINC01555Q8NAE3 123 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 ZFP62Q8NB50 900 aaPredicted RBP6.3□□□□□ -1.4
CDH1-203ENST00000561751 C8orf44Q96CB5 159 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 REEP6Q96HR9 211 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 ZNF48Q96MX3 618 aaPredicted RBP6.3□□□□□ -1.4
CDH1-203ENST00000561751 SLC46A1Q96NT5 459 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 ATP5SQ99766 215 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 PAAF1Q9BRP4 392 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 S1PR5Q9H228 398 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 MANBALQ9NQG1 85 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 INSL6Q9Y581 213 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 TIMM9Q9Y5J7 89 aa6.3□□□□□ -1.4
CDH1-203ENST00000561751 A0A1B0GVT2 93 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 MEIS3P2A8K0S8 358 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 FOXI3A8MTJ6 420 aaPredicted RBP6.29□□□□□ -1.4
CDH1-203ENST00000561751 METTL12A8MUP2 240 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 C17orf112F2Z3M2 114 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 ZNF253O75346 499 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 GJB5O95377 273 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 IL33O95760 270 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 NUDT14O95848 222 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 IFNA5P01569 189 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 HPNP05981 417 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 H2BFMP0C1H6 154 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 ASAH2BP0C7U1 165 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 GNB3P16520 340 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 TSPOP30536 169 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 CLDN15P56746 228 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 ARG2P78540 354 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 HYAL1Q12794 435 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 BATFQ16520 125 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 MEP1BQ16820 701 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 CTXN3Q4LDR2 81 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 OR10J3Q5JRS4 329 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 LDLRAD2Q5SZI1 272 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 RAET1LQ5VY80 246 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 MRPL54Q6P161 138 aaKnown RBP6.29□□□□□ -1.4
CDH1-203ENST00000561751 VHLLQ6RSH7 139 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 C12orf54Q6X4T0 127 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 DPY19L4Q7Z388 723 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 VASH2Q86V25 355 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.29□□□□□ -1.4
CDH1-203ENST00000561751 ZIC4Q8N9L1 334 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 OR4P4Q8NGL7 312 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 PSMF1Q92530 271 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 FGF14Q92915 247 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 IL22RA2Q969J5 263 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 MSI2Q96DH6 328 aaKnown RBP6.29□□□□□ -1.4
CDH1-203ENST00000561751 STARD4Q96DR4 205 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 LOXL4Q96JB6 756 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 CCDC74BQ96LY2 380 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 SMIM7Q9BQ49 75 aa6.29□□□□□ -1.4
CDH1-203ENST00000561751 TM2D1Q9BX74 207 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms