RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 OR10K1Q8NGX5 313 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 ZNF596Q8TC21 504 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 WIPF2Q8TF74 440 aaPredicted RBP8.25□□□□□ -1.09
CLK3-205ENST00000561673 TNFAIP8L1Q8WVP5 186 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 CYGBQ8WWM9 190 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 STMN2Q93045 179 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 TMEM106AQ96A25 262 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 CPNE2Q96FN4 548 aaPredicted RBP8.25□□□□□ -1.09
CLK3-205ENST00000561673 OR5M11Q96RB7 305 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 ZFAND3Q9H8U3 227 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 ZNF286AQ9HBT8 521 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 BABAM2Q9NXR7 383 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 OR6C3Q9NZP0 311 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 CLEC2DQ9UHP7 191 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 DSCAML1Q8TD84 2053 aa8.25□□□□□ -1.09
CLK3-205ENST00000561673 A0A087X0M5 115 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 KBTBD11-OT1A0A1B0GTJ5 212 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 A0A1B0GX30 115 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 ZNF729A6NN14 1252 aaPredicted RBP8.24□□□□□ -1.09
CLK3-205ENST00000561673 LEUTXA8MZ59 168 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 LY6LH3BQJ8 138 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 BUB1B-PAK6H3BSN5 160 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 H3BUI4 141 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 TOR1AO14656 332 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 FBXO24O75426 580 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 CDRT1O95170 752 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 OPN1MWP04001 364 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 ALDOBP05062 364 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 CD2P06729 351 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 OPN1MW2P0DN77 364 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 OPN1MW3P0DN78 364 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 NFYBP25208 207 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 OR3A4PP47883 348 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 PRRX1P54821 245 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 ADARB1P78563 741 aaKnown RBP8.24□□□□□ -1.09
CLK3-205ENST00000561673 IL13RA2Q14627 380 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 HLA-DRB5Q30154 266 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 NSUN5P1Q3KNT7 163 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 FBLN7Q53RD9 439 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 PAN3Q58A45 887 aaKnown RBP8.24□□□□□ -1.09
CLK3-205ENST00000561673 TTC23Q5W5X9 447 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 ORAI1Q96D31 301 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 BARHL1Q9BZE3 327 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 WNT10AQ9GZT5 417 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 FAM192AQ9GZU8 254 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 ZNF581Q9P0T4 197 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 KIF25Q9UIL4 384 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 ING4Q9UNL4 249 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 DIMT1Q9UNQ2 313 aaKnown RBP8.24□□□□□ -1.09
CLK3-205ENST00000561673 ZNF281Q9Y2X9 895 aa8.24□□□□□ -1.09
CLK3-205ENST00000561673 EXOSC1Q9Y3B2 195 aaKnown RBP8.24□□□□□ -1.09
CLK3-205ENST00000561673 MEIKINA0A087WXM9 373 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 IRGMA1A4Y4 181 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 G3V4G9 280 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 HTR3BO95264 441 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 LALBAP00709 142 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 IGHV3-7P01780 117 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 MYL12AP19105 171 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 C21orf33P30042 268 aaPredicted RBP8.23□□□□□ -1.09
CLK3-205ENST00000561673 BRS3P32247 399 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 ZNF93P35789 620 aaPredicted RBP8.23□□□□□ -1.09
CLK3-205ENST00000561673 GLP1RP43220 463 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 VDAC2P45880 294 aaPredicted RBP8.23□□□□□ -1.09
CLK3-205ENST00000561673 RBM39Q14498 530 aaKnown RBP8.23□□□□□ -1.09
CLK3-205ENST00000561673 TMEM95Q3KNT9 176 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 TPTE2P1Q5T6R2 138 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 RSBN1Q5VWQ0 802 aaPredicted RBP8.23□□□□□ -1.09
CLK3-205ENST00000561673 DMKNQ6E0U4 476 aaPredicted RBP8.23□□□□□ -1.09
CLK3-205ENST00000561673 DHRSXQ8N5I4 330 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 ZNF485Q8NCK3 441 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 OR13A1Q8NGR1 328 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 OR13C5Q8NGS8 318 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 GGHQ92820 318 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 GHSRQ92847 366 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 LEAP2Q969E1 77 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 CREB3L1Q96BA8 519 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 SMIM19Q96E16 107 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 TMEM80Q96HE8 168 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 KIRREL1Q96J84 757 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 CITED4Q96RK1 184 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 CITED2Q99967 270 aaPredicted RBP8.23□□□□□ -1.09
CLK3-205ENST00000561673 METTL9Q9H1A3 318 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 NCOR1P1Q9H4R4 102 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 LINC00574Q9H8X3 128 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 TMEM138Q9NPI0 162 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 CALYQ9NYX4 217 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 ST3GAL6Q9Y274 331 aa8.23□□□□□ -1.09
CLK3-205ENST00000561673 TET2Q6N021 2002 aaPredicted RBP8.23□□□□□ -1.09
CLK3-205ENST00000561673 TRAV39A0A0B4J263 110 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 TRBV5-5A0A0J9YX44 114 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 ADARB2-AS1A8MUL3 147 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 PEX14O75381 377 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 GNAO1P09471 354 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 IGFBP3P17936 291 aaPredicted RBP8.22□□□□□ -1.09
CLK3-205ENST00000561673 BDKRB2P30411 391 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 CEACAM3P40198 252 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 ARHGDIBP52566 201 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 RPS11P62280 158 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLK3-205ENST00000561673 PPP3R1P63098 170 aa8.22□□□□□ -1.09
CLK3-205ENST00000561673 PAX5Q02548 391 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms