RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 RFKQ969G6 155 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 CREB3L1Q96BA8 519 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 C10orf35Q96D05 121 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 YIPF6Q96EC8 236 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 BORCS8Q96FH0 119 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 B9D2Q9BPU9 175 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 FUNDC2Q9BWH2 189 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 CHST6Q9GZX3 395 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 GAL3ST2Q9H3Q3 398 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 HHLA2Q9UM44 414 aa9.42□□□□□ -0.9
CARMIL3-204ENST00000561354 TRGV10A0A0A0MS01 117 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 TRBV2A0A0J9YWF9 115 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 INMTO95050 263 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 RPP14O95059 124 aaKnown RBP9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 KRT8P05787 483 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 CD34P28906 385 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 CEACAM3P40198 252 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 OR3A1P47881 315 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 NPBWR2P48146 333 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 RBP2P50120 134 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 ST3GAL4Q11206 333 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 DCTN2Q13561 401 aaKnown RBP9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 TIMM50Q3ZCQ8 353 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 KHDC1LQ5JSQ8 128 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 SPIN3Q5JUX0 258 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 BCDIN3DQ7Z5W3 292 aaKnown RBP9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 TRAPPC6BQ86SZ2 158 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 MRPL41Q8IXM3 137 aaKnown RBP9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 FAM58AQ8N1B3 248 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 OSR2Q8N2R0 312 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 YIPF7Q8N8F6 280 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 CORO2AQ92828 525 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 MRPS18AQ9NVS2 196 aaKnown RBP9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 RBFOX1Q9NWB1 397 aaKnown RBP9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 TAS2R3Q9NYW6 316 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 IL36RNQ9UBH0 155 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 GLS2Q9UI32 602 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 DNAH3Q8TD57 4116 aa9.41□□□□□ -0.9
CARMIL3-204ENST00000561354 A0A087X0M5 115 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 A0A1B0GX30 115 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 FUOMA2VDF0 154 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 OOSP1A8MZH6 123 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 ENTPD6O75354 484 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 SULT1C4O75897 302 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 CYB5AP00167 134 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 DBTP11182 482 aaKnown RBP9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 CDK2P24941 298 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 LMO1P25800 156 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 DUSP1P28562 367 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 MAP2K4P45985 399 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 SERPINB10P48595 397 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 ATP1B3P54709 279 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 RAB40BQ12829 278 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 TMED1Q13445 227 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 ODF4Q2M2E3 257 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 PRAMEF5Q5TYX0 476 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 BAIAP2L2Q6UXY1 529 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 SLC16A12Q6ZSM3 486 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 SSX6Q7RTT6 188 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 GID4Q8IVV7 300 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 TCEANCQ8N8B7 351 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 OR51D1Q8NGF3 324 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 PP6455Q8WZ26 134 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 TMEM80Q96HE8 168 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 MCRIP2Q9BUT9 160 aaKnown RBP9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 MND1Q9BWT6 205 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 AASSQ9UDR5 926 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 ERGIC3Q9Y282 383 aa9.4□□□□□ -0.9
CARMIL3-204ENST00000561354 PSMB11A5LHX3 300 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 METTL15A6NJ78 407 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 SH2D7A6NKC9 451 aaPredicted RBP9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 LY6LH3BQJ8 138 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 BUB1B-PAK6H3BSN5 160 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 SH2D1BO14796 132 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 OR2T7P0C7T2 308 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 PRKACAP17612 351 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 BCL3P20749 454 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 SLC6A1P30531 599 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 MNDAP41218 407 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 THBS3P49746 956 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 PRRX1P54821 245 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 CTF1Q16619 201 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 HLA-DRB5Q30154 266 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 TPTE2P1Q5T6R2 138 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 CCDC144NLQ6NUI1 221 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 ETV3LQ6ZN32 361 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 IL4I1Q96RQ9 567 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF286AQ9HBT8 521 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 HMG20AQ9NP66 347 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 ZMAT5Q9UDW3 170 aaKnown RBP9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 DIMT1Q9UNQ2 313 aaKnown RBP9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 RYR3Q15413 4870 aa9.39□□□□□ -0.91
CARMIL3-204ENST00000561354 IGKV1-9A0A0C4DH69 117 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 A0A1W2PQL4 384 aaPredicted RBP9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM90A18PA6NE21 464 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM90A16PA6NEW6 464 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM90A20PA6NIJ5 464 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM90A12PA8MX19 464 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms