RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 PRRT1Q99946 306 aa5.75□□□□□ -1.49
SPG11-224ENST00000561268 PDCD1LG2Q9BQ51 273 aa5.75□□□□□ -1.49
SPG11-224ENST00000561268 UQCC2Q9BRT2 126 aa5.75□□□□□ -1.49
SPG11-224ENST00000561268 OPA3Q9H6K4 179 aa5.75□□□□□ -1.49
SPG11-224ENST00000561268 MOB1AQ9H8S9 216 aa5.75□□□□□ -1.49
SPG11-224ENST00000561268 LPAR2Q9HBW0 351 aa5.75□□□□□ -1.49
SPG11-224ENST00000561268 ESM1Q9NQ30 184 aa5.75□□□□□ -1.49
SPG11-224ENST00000561268 PPP1R3CQ9UQK1 317 aa5.75□□□□□ -1.49
SPG11-224ENST00000561268 INSIG2Q9Y5U4 225 aa5.75□□□□□ -1.49
SPG11-224ENST00000561268 A0A0B4J2A0 478 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 C5orf63A6NC05 138 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 METTL21EPA6NDL7 271 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 ZNF878C9JN71 531 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 F5H5P2 479 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 H0YL77 283 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 TRAPPC2LH3BP13 241 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 LDLRAD4O15165 306 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 MAGEB4O15481 346 aaPredicted RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 BPNT1O95861 308 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 PLATP00750 562 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 WNT2P09544 360 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 UBBP0CG47 229 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 MGMTP16455 207 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 SELEP16581 610 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 RBMXP38159 391 aaKnown RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 PSMB10P40306 273 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 PMELP40967 661 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 NAA10P41227 235 aaPredicted RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 VEGFCP49767 419 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 RIDAP52758 137 aaKnown RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 TSPAN5P62079 268 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 RPS27AP62979 156 aaKnown RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 UBA52P62987 128 aaKnown RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 CYCSP99999 105 aaKnown RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 PAX8Q06710 450 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 ZNF154Q13106 437 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 ARL6IP1Q15041 203 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 RAB11BQ15907 218 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 SNAI3Q3KNW1 292 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 ACTBL2Q562R1 376 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 KLF17Q5JT82 389 aaPredicted RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 DRAM2Q6UX65 266 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 DOK3Q7L591 496 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 PEG10Q86TG7 708 aaKnown RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 COMMD7Q86VX2 200 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 LYPD6Q86Y78 171 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 OR5AS1Q8N127 324 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 ZNF676Q8N7Q3 588 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 PLPP7Q8NBV4 271 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 OR2AK2Q8NG84 335 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 FAM216AQ8WUB2 273 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 RNF133Q8WVZ7 376 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 SLC25A28Q96A46 364 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 FAM3DQ96BQ1 224 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 C1orf147Q96MC9 270 aaPredicted RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 AUNIPQ9H7T9 357 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 MMP26Q9NRE1 261 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 SHPKQ9UHJ6 478 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 PFDN2Q9UHV9 154 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 HHLA2Q9UM44 414 aa5.74□□□□□ -1.49
SPG11-224ENST00000561268 MRPS7Q9Y2R9 242 aaKnown RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 NOP16Q9Y3C1 178 aaKnown RBP5.74□□□□□ -1.49
SPG11-224ENST00000561268 IGHV2-70DA0A0C4DH43 119 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 A0A1B0GTI1 187 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 hCG_38984A0A1B0GV85 526 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 LOC105371267A0A1B0GV96 52 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 TMEM89A2RUT3 159 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 RNF222A6NCQ9 220 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 CD300LBA8K4G0 201 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 TEX46H3BTG2 121 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 I3L521 148 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 TNFRSF13BO14836 293 aaPredicted RBP5.73□□□□□ -1.49
SPG11-224ENST00000561268 ARPC1BO15143 372 aaKnown RBP5.73□□□□□ -1.49
SPG11-224ENST00000561268 XRCC2O43543 280 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 CA11O75493 328 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 SRSF10O75494 262 aaKnown RBP5.73□□□□□ -1.49
SPG11-224ENST00000561268 CHRM2P08172 466 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 NMBP08949 121 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 HSD11B1P28845 292 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 RPS27P42677 84 aaKnown RBP5.73□□□□□ -1.49
SPG11-224ENST00000561268 TAS2R31P59538 309 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 LCN2P80188 198 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 ZNF92Q03936 586 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 OR8B8Q15620 311 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 PNLIPRP3Q17RR3 467 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 GLYATL3Q5SZD4 288 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 STEAP1BQ6NZ63 245 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 GSG1LQ6UXU4 331 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 ZNF841Q6ZN19 808 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 Q6ZTK2 550 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 DCXRQ7Z4W1 244 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 NAA40Q86UY6 237 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 CATSPERDQ86XM0 798 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 PDZD9Q8IXQ8 264 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 C1orf87Q8N0U7 546 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 PRSS35Q8N3Z0 413 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 OR5T2Q8NGG2 359 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 OR5M8Q8NGP6 311 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 OR13C5Q8NGS8 318 aa5.73□□□□□ -1.49
SPG11-224ENST00000561268 OR2AJ1Q8NGZ0 328 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms