RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 PHYHIPQ92561 330 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 CORO2AQ92828 525 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 ZNF714Q96N38 554 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 CHIAQ9BZP6 476 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 IFT22Q9H7X7 185 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 NDUFB11Q9NX14 153 aa11.3□□□□□ -0.6
TPM1-230ENST00000561266 MEIOCA2RUB1 952 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 MEGF11A6BM72 1044 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 FAM172BPA6NC97 362 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 MRPS14O60783 128 aaKnown RBP11.29□□□□□ -0.6
TPM1-230ENST00000561266 OR7C1O76099 320 aaPredicted RBP11.29□□□□□ -0.6
TPM1-230ENST00000561266 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 GTF2F2P13984 249 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 MGMTP16455 207 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 JUNBP17275 347 aaPredicted RBP11.29□□□□□ -0.6
TPM1-230ENST00000561266 OMGP23515 440 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 IER3P46695 156 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 GUCA2AQ02747 115 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 PLA2G7Q13093 441 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 UNC119Q13432 240 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 NCR3LG1Q68D85 454 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 ZNF773Q6PK81 442 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 CD200R1LQ6Q8B3 271 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 RBMS3Q6XE24 437 aaKnown RBP11.29□□□□□ -0.6
TPM1-230ENST00000561266 C5orf24Q7Z6I8 188 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 NKAIN3Q8N8D7 197 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 ZFAND2BQ8WV99 257 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 FAM46BQ96A09 425 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 Q96M66 194 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 JMJD8Q96S16 334 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 DPCDQ9BVM2 203 aaPredicted RBP11.29□□□□□ -0.6
TPM1-230ENST00000561266 ZNRD1Q9P1U0 126 aa11.29□□□□□ -0.6
TPM1-230ENST00000561266 A0A0A6YYD4 124 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 ODF3BA8MYP8 253 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 CLDN34H7C241 214 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 SLC22A1O15245 554 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 RNASE1P07998 156 aaKnown RBP11.28□□□□□ -0.6
TPM1-230ENST00000561266 CALRP27797 417 aaKnown RBP11.28□□□□□ -0.6
TPM1-230ENST00000561266 PSMB9P28065 219 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 P2RY14Q15391 338 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 ATAD3CQ5T2N8 411 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 FAM53AQ6NSI3 398 aaPredicted RBP11.28□□□□□ -0.6
TPM1-230ENST00000561266 TRAPPC6BQ86SZ2 158 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 NR2C2APQ86WQ0 139 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 LDLRAD3Q86YD5 345 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 SVOPQ8N4V2 548 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 SPATA3Q8NHX4 192 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 PPP1R35Q8TAP8 253 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 DYRK2Q92630 601 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 THRSPQ92748 146 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 S100A13Q99584 98 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 SELENOIQ9C0D9 397 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 HEXA-AS1Q9H8Q6 139 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 RCC2Q9P258 522 aaKnown RBP11.28□□□□□ -0.6
TPM1-230ENST00000561266 UBE2J1Q9Y385 318 aaPredicted RBP11.28□□□□□ -0.6
TPM1-230ENST00000561266 SESN1Q9Y6P5 492 aa11.28□□□□□ -0.6
TPM1-230ENST00000561266 A0A1W2PPH5 198 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 TMEM89A2RUT3 159 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 FAM90A8PA6NJQ4 464 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 RRP9O43818 475 aaKnown RBP11.27□□□□□ -0.61
TPM1-230ENST00000561266 ZNF780AO75290 641 aaPredicted RBP11.27□□□□□ -0.61
TPM1-230ENST00000561266 CRTAPO75718 401 aaPredicted RBP11.27□□□□□ -0.61
TPM1-230ENST00000561266 CLPXO76031 633 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 RBP4P02753 201 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 CDK2P24941 298 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 CLDN12P56749 244 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 OR10A3P58181 314 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 RELBQ01201 579 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 TRAM1Q15629 374 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 MPV17LQ2QL34 196 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 KCTD21Q4G0X4 260 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 GLT8D1Q68CQ7 371 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 UBALD1Q8TB05 177 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 FOXRED1Q96CU9 486 aaPredicted RBP11.27□□□□□ -0.61
TPM1-230ENST00000561266 NICN1Q9BSH3 213 aa11.27□□□□□ -0.61
TPM1-230ENST00000561266 MEIKINA0A087WXM9 373 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 TRGV10A0A0A0MS01 117 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 IGHV2-26A0A0B4J1V2 119 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 TRDV1A0A1B0GX56 115 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 SMIM30A4D0T7 59 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 TMEM14DPA8MWL7 114 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 MPIG6BO95866 241 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 ARG1P05089 322 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 PSMA1P25786 263 aaKnown RBP11.26□□□□□ -0.61
TPM1-230ENST00000561266 HTR2CP28335 458 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 GLP1RP43220 463 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 PAX5Q02548 391 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 GPR176Q14439 515 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 MIDNQ504T8 468 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 ZNF626Q68DY1 528 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 C22orf42Q6IC83 251 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 C16orf87Q6PH81 154 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 HEPN1Q6WQI6 88 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 OR11H6Q8NGC7 330 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 RFESDQ8TAC1 157 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 PIFOQ8TCI5 191 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 MRGPRDQ8TDS7 321 aa11.26□□□□□ -0.61
TPM1-230ENST00000561266 CCDC107Q8WV48 283 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms