RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FIS1Q9Y3D6 152 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 PALLDQ8WX93 1383 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 ZFYVE9O95405 1425 aa1.57□□□□□ -2.16
RTF1-207ENST00000561076 POLA1P09884 1462 aaPredicted RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 MAPKBP1O60336 1514 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 DNMBPQ6XZF7 1577 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PHF3Q92576 2039 aaKnown RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 TRAV8-1A0A0A6YYK1 113 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 IGHV3-74A0A0B4J1X5 117 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PQLC2LA1A4F0 135 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 EVPLLA8MZ36 301 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 B4DEV8 164 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 EEF1E1-BLOC1S5C9J1V9 151 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 BHLHE40O14503 412 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 SOCS3O14543 225 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 EEF1E1O43324 174 aaKnown RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 CCDC22O60826 627 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 FOXH1O75593 365 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 SERPINB7O75635 380 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 MMP23AO75900 390 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 S1PR2O95136 353 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 VENTXO95231 258 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 CRYZL1O95825 349 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 MT-CO2P00403 227 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 IGKV1D-16P01601 117 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 TRBV12-3P01733 135 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 SOD3P08294 240 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 CECR9P0C854 216 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 KCNE1P15382 129 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 CXCL3P19876 107 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 CDK2P24941 298 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 CD70P32970 193 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 MARCKSL1P49006 195 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 ZNF138P52744 262 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 MP68P56378 58 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 RAB5BP61020 215 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 RAP1AP62834 184 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 CRADDP78560 199 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 MRPS21P82921 87 aaKnown RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 REG3AQ06141 175 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PAX8Q06710 450 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 FABP9Q0Z7S8 132 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PRDX4Q13162 271 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PNOCQ13519 176 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 SSX1Q16384 188 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 CCDC153Q494R4 210 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 ZNF658BQ4V348 819 aaPredicted RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 HIGD2BQ4VC39 106 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 TRMT12Q53H54 448 aaKnown RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 AKR1C8PQ5T2L2 129 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 TMEM215Q68D42 235 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 TMEM42Q69YG0 159 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 ELP2Q6IA86 826 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 SMARCD3Q6STE5 483 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 C5orf46Q6UWT4 87 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 ZNF771Q7L3S4 317 aaPredicted RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 FA2HQ7L5A8 372 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 TMEM144Q7Z5S9 345 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 OOSP2Q86WS3 158 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PRIMA1Q86XR5 153 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 C20orf196Q8IYI0 205 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 UBL4BQ8N7F7 174 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 OR51A2Q8NGJ7 313 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 OR10G4Q8NGN3 311 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 OR9I1Q8NGQ6 314 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 OR2K2Q8NGT1 345 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 GRPEL2Q8TAA5 225 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 ABHD3Q8WU67 409 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 ACOT12Q8WYK0 555 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 GHSRQ92847 366 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 SLC35B4Q969S0 331 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 RPUSD4Q96CM3 377 aaKnown RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 NEURL3Q96EH8 262 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 LINC00479Q96M42 142 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 SPACA5Q96QH8 159 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 CAMK2N2Q96S95 79 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 ZNF382Q96SR6 550 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 OPRPNQ99935 248 aaPredicted RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 ZNF2Q9BSG1 426 aaPredicted RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 MED18Q9BUE0 208 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 COMMD5Q9GZQ3 224 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 ZSCAN16Q9H4T2 348 aaPredicted RBP1.56□□□□□ -2.16
RTF1-207ENST00000561076 POMKQ9H5K3 350 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 C12orf10Q9HB07 376 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 NOX3Q9HBY0 568 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 TMEM138Q9NPI0 162 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 SCRT2Q9NQ03 307 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 UBQLN4Q9NRR5 601 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 SPANXCQ9NY87 97 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 NYAP2Q9P242 653 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 ENOPH1Q9UHY7 261 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 DNAJC12Q9UKB3 198 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PYCARDQ9ULZ3 195 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PROCRQ9UNN8 238 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 BTRCQ9Y297 605 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 TIMM22Q9Y584 194 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 OR51B4Q9Y5P0 310 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 CACNG2Q9Y698 323 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 PTPRGP23470 1445 aa1.56□□□□□ -2.16
RTF1-207ENST00000561076 NCOA1Q15788 1441 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms