RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 EHFQ9NZC4 300 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 IL36GQ9NZH8 169 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF319Q9P2F9 582 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 DHCR7Q9UBM7 475 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 METTL1Q9UBP6 276 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 FBXL17Q9UF56 701 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 CACFD1Q9UGQ2 172 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ATPIF1Q9UII2 106 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 FBXO9Q9UK97 447 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 MCTS1Q9ULC4 181 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 HSF4Q9ULV5 492 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 C14orf166Q9Y224 244 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 POLR1DQ9Y2S0 133 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 STARD10Q9Y365 291 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 FAM96BQ9Y3D0 163 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 HDGFL3Q9Y3E1 203 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 STRAPQ9Y3F4 350 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 PCDHGA1Q9Y5H4 931 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ESPL1Q14674 2120 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 KIAA2026Q5HYC2 2103 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 CHD3Q12873 2000 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 IGKV1D-8A0A087WSZ0 117 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 BORCS7-ASMTA0A0B4J1R7 106 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 C13orf42A0A1B0GVH6 325 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 DUXBA0A1W2PPF3 345 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CLEC18AA5D8T8 446 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 C5orf63A6NC05 138 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 A6NNC1 897 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 C1orf196B1AJZ1 125 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 C9JQL5 133 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 E5RGE8 158 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 H3BML4 177 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 STMND1H3BQB6 276 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 K7EPK0 472 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 RER1O15258 196 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 TOX3O15405 576 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 PPIHO43447 177 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 DNPH1O43598 174 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 GMFGO60234 142 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 GPR137BO60478 399 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 PITX3O75364 302 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CRTAPO75718 401 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 EIF3GO75821 320 aaKnown RBP eCLIP2.1□□□□□ -2.07
SPG11-223ENST00000560858 PIAS2O75928 621 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 FARS2O95363 451 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 MT-ND4LP03901 98 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 HCKP08631 526 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 WNT2P09544 360 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OR8U8P0C7N1 319 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OR8U9P0C7N5 309 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 DANCRP0C864 163 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 GIMD1P0DJR0 217 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 MSR1P21757 451 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CRYGSP22914 178 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 NFYBP25208 207 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 FKBP2P26885 142 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 CHATP28329 748 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 FCGR2CP31995 323 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CDAP32320 146 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CD80P33681 288 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SNCAP37840 140 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 RBMXP38159 391 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 RPL35P42766 123 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 PTGFRP43088 359 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 GLP1RP43220 463 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OR3A2P47893 321 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 DHPSP49366 369 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 RAB5CP51148 216 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ZNF41P51814 821 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 AKR1D1P51857 326 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ARHGDIBP52566 201 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SNU13P55769 128 aaKnown RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 FBXW4P57775 412 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 STARD6P59095 220 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 S100A10P60903 97 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 RND3P61587 244 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 RAB1AP62820 205 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 CSNK2A1P68400 391 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 H3F3AP84243 136 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ACY1Q03154 408 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ARFRP1Q13795 201 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 IL13RA2Q14627 380 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 TMEM187Q14656 261 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 SMCO1Q147U7 214 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 RAB35Q15286 201 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OR8B8Q15620 311 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 KISS1Q15726 138 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 NSDHLQ15738 373 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 RAB30Q15771 203 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 UBE2V2Q15819 145 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 IAH1Q2TAA2 248 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 DEFB133Q30KQ1 61 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 DNLZQ5SXM8 178 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 GGNBP1Q5YKI7 109 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 PMS2CLQ68D20 193 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ABLIM2Q6H8Q1 611 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 OR2A2Q6IF42 318 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 WDR74Q6RFH5 385 aaPredicted RBP2.1□□□□□ -2.07
SPG11-223ENST00000560858 PLXDC2Q6UX71 529 aa2.1□□□□□ -2.07
SPG11-223ENST00000560858 ASCL4Q6XD76 172 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms