RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 FAM173BQ6P4H8 233 aa2.96□□□□□ -1.94
MARK3-220ENST00000560417 SETD3Q86TU7 594 aaPredicted RBP2.96□□□□□ -1.94
MARK3-220ENST00000560417 BLIDQ8IZY5 108 aa2.96□□□□□ -1.94
MARK3-220ENST00000560417 RNF10Q8N5U6 811 aaKnown RBP2.96□□□□□ -1.94
MARK3-220ENST00000560417 DNAJB3Q8WWF6 145 aa2.96□□□□□ -1.94
MARK3-220ENST00000560417 ING5Q8WYH8 240 aa2.96□□□□□ -1.94
MARK3-220ENST00000560417 MBOAT7Q96N66 472 aa2.96□□□□□ -1.94
MARK3-220ENST00000560417 GPR82Q96P67 336 aa2.96□□□□□ -1.94
MARK3-220ENST00000560417 C6orf50Q9HD87 102 aa2.96□□□□□ -1.94
MARK3-220ENST00000560417 V9GYY9 64 aa2.96□□□□□ -1.94
MARK3-220ENST00000560417 MYH9P35579 1960 aaKnown RBP2.96□□□□□ -1.94
MARK3-220ENST00000560417 CUL9Q8IWT3 2517 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 TRIOO75962 3097 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 NLRC5Q86WI3 1866 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 TMEM72A0PK05 275 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 ZNF98A6NK75 572 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 BOLA2-SMG1P6H3BVE0 249 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 VAPBO95292 243 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 MAS1P04201 325 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 RHOCP08134 193 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 CD52P31358 61 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 XIAPP98170 497 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 DYNC1I2Q13409 638 aaKnown RBP2.95□□□□□ -1.94
MARK3-220ENST00000560417 MAD2L1BPQ15013 274 aaPredicted RBP2.95□□□□□ -1.94
MARK3-220ENST00000560417 TAL2Q16559 108 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 LINC00303Q3SY05 128 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 C16orf47Q6ZP98 133 aaPredicted RBP2.95□□□□□ -1.94
MARK3-220ENST00000560417 DEFB123Q8N688 67 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 RHOXF2Q9BQY4 288 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 ZNF302Q9NR11 478 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 SLC7A11Q9UPY5 501 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 GINS2Q9Y248 185 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 MYO7AQ13402 2215 aa2.95□□□□□ -1.94
MARK3-220ENST00000560417 PRRC2BQ5JSZ5 2229 aaKnown RBP2.95□□□□□ -1.94
MARK3-220ENST00000560417 BRWD1Q9NSI6 2320 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 PLXNA4Q9HCM2 1894 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 WDFY4Q6ZS81 3184 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 MYO9BQ13459 2157 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 TTC28Q96AY4 2481 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 LOC102724200A0A096LPH7 203 aaPredicted RBP2.94□□□□□ -1.94
MARK3-220ENST00000560417 FAM240AA0A1B0GVK7 77 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 CEACAM18A8MTB9 384 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 SEC14L6B5MCN3 397 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 M0R1B8 84 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 PRMT5O14744 637 aaPredicted RBP2.94□□□□□ -1.94
MARK3-220ENST00000560417 NDUFS5O43920 106 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 IGKV1D-16P01601 117 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 IGLV3-19P01714 112 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 MPV17P39210 176 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 GRB2P62993 217 aaKnown RBP2.94□□□□□ -1.94
MARK3-220ENST00000560417 TOMM34Q15785 309 aaPredicted RBP2.94□□□□□ -1.94
MARK3-220ENST00000560417 CDNFQ49AH0 187 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 TTC32Q5I0X7 151 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 MED27Q6P2C8 311 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 PID1Q7Z2X4 250 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 CA13Q8N1Q1 262 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 NDNFQ8TB73 568 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 CCDC12Q8WUD4 166 aaPredicted RBP2.94□□□□□ -1.94
MARK3-220ENST00000560417 C8orf76Q96K31 380 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 LXNQ9BS40 222 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 CXCL16Q9H2A7 254 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 ANKHQ9HCJ1 492 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 XPNPEP1Q9NQW7 623 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 STMN3Q9NZ72 180 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 IL37Q9NZH6 218 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 ACOT9Q9Y305 439 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 BDP1A6H8Y1 2624 aa2.94□□□□□ -1.94
MARK3-220ENST00000560417 TRAV8-7A0A075B6U6 113 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 VPS37CA5D8V6 355 aaPredicted RBP2.93□□□□□ -1.94
MARK3-220ENST00000560417 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.93□□□□□ -1.94
MARK3-220ENST00000560417 K7EN84 100 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 UPK1AO00322 258 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 NEMFO60524 1076 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 IDH2P48735 452 aaKnown RBP2.93□□□□□ -1.94
MARK3-220ENST00000560417 BTN1A1Q13410 526 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 IGFBP7Q16270 282 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 C6orf183Q5T699 404 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 SPINT4Q6UDR6 99 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 SYS1Q8N2H4 156 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 LINC00337Q8N6G1 96 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 SLC26A10Q8NG04 563 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 OR6N2Q8NGY6 317 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 HGDQ93099 445 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 SPACA5Q96QH8 159 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 LLPHQ9BRT6 129 aaKnown RBP2.93□□□□□ -1.94
MARK3-220ENST00000560417 MS4A8Q9BY19 250 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 FRMD8P1Q9BZ68 369 aaPredicted RBP2.93□□□□□ -1.94
MARK3-220ENST00000560417 SYT4Q9H2B2 425 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 SND1-IT1Q9HBX3 110 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 DDIT4Q9NX09 232 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 NRCAMQ92823 1304 aa2.93□□□□□ -1.94
MARK3-220ENST00000560417 RALGAPA2Q2PPJ7 1873 aa2.92□□□□□ -1.94
MARK3-220ENST00000560417 TVP23AA6NH52 213 aa2.92□□□□□ -1.94
MARK3-220ENST00000560417 LIPCP11150 499 aa2.92□□□□□ -1.94
MARK3-220ENST00000560417 SYT1P21579 422 aa2.92□□□□□ -1.94
MARK3-220ENST00000560417 BGNP21810 368 aa2.92□□□□□ -1.94
MARK3-220ENST00000560417 NUP62P37198 522 aaPredicted RBP2.92□□□□□ -1.94
MARK3-220ENST00000560417 GDI2P50395 445 aaKnown RBP2.92□□□□□ -1.94
MARK3-220ENST00000560417 ADIGQ0VDE8 80 aa2.92□□□□□ -1.94
MARK3-220ENST00000560417 FAM53BQ14153 422 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms