RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 ING3Q9NXR8 418 aa17.93■□□□□ 0.46
SNX1-210ENST00000560260 A0A1W2PQ09 198 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 PDCD6O75340 191 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 LIPFP07098 398 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 CCL3L1P16619 93 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 CHATP28329 748 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 ERP29P30040 261 aaKnown RBP17.92■□□□□ 0.46
SNX1-210ENST00000560260 GLIPR1P48060 266 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 ARF6P62330 175 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 SPCS2Q15005 226 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 IDNKQ5T6J7 187 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 RSBN1Q5VWQ0 802 aaPredicted RBP17.92■□□□□ 0.46
SNX1-210ENST00000560260 RAB12Q6IQ22 244 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 FAM89BQ8N5H3 189 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 Q8N7P7 452 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 OR5H6Q8NGV6 325 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 DYRK2Q92630 601 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 SLC25A46Q96AG3 418 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 AUP1Q9Y679 476 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 CEPT1Q9Y6K0 416 aa17.92■□□□□ 0.46
SNX1-210ENST00000560260 SOCS1O15524 211 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 DLX1P56177 255 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 DLX6P56179 175 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 MOGAT2Q3SYC2 334 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 TBX15Q96SF7 602 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 MRI1Q9BV20 369 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 RBM38Q9H0Z9 239 aaKnown RBP17.91■□□□□ 0.46
SNX1-210ENST00000560260 DCSTAMPQ9H295 470 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 ONECUT1Q9UBC0 465 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 RAB22AQ9UL26 194 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 PEX16Q9Y5Y5 336 aa17.91■□□□□ 0.46
SNX1-210ENST00000560260 FUT3P21217 361 aa17.9■□□□□ 0.46
SNX1-210ENST00000560260 TMBIM6P55061 237 aa17.9■□□□□ 0.46
SNX1-210ENST00000560260 TMEM50BP56557 158 aa17.9■□□□□ 0.46
SNX1-210ENST00000560260 KRBOX4Q5JUW0 171 aa17.9■□□□□ 0.46
SNX1-210ENST00000560260 NKAPLQ5M9Q1 402 aa17.9■□□□□ 0.46
SNX1-210ENST00000560260 KIR3DL3Q8N743 410 aa17.9■□□□□ 0.46
SNX1-210ENST00000560260 RAB2BQ8WUD1 216 aa17.9■□□□□ 0.46
SNX1-210ENST00000560260 SULT4A1Q9BR01 284 aa17.9■□□□□ 0.46
SNX1-210ENST00000560260 URM1Q9BTM9 101 aaKnown RBP17.9■□□□□ 0.46
SNX1-210ENST00000560260 SPACA1Q9HBV2 294 aa17.9■□□□□ 0.46
SNX1-210ENST00000560260 ODAMA1E959 279 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 FSHBP01225 129 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 RAB6AP20340 208 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 KCNJ3P48549 501 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 VEGFCP49767 419 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 ERVFRD-1P60508 538 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 PAX5Q02548 391 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 PRB3Q04118 309 aaPredicted RBP17.89■□□□□ 0.45
SNX1-210ENST00000560260 MEF2CQ06413 473 aaPredicted RBP17.89■□□□□ 0.45
SNX1-210ENST00000560260 KLF17Q5JT82 389 aaPredicted RBP17.89■□□□□ 0.45
SNX1-210ENST00000560260 USP43Q70EL4 1123 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 C6orf201Q7Z4U5 140 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 C11orf42Q8N5U0 333 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 ISOC1Q96CN7 298 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 SLC25A38Q96DW6 304 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 POM121Q96HA1 1249 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 DMRTB1Q96MA1 342 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 WDFY2Q96P53 400 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 KIF25Q9UIL4 384 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 KPTNQ9Y664 436 aa17.89■□□□□ 0.45
SNX1-210ENST00000560260 H3BMQ9 156 aa17.88■□□□□ 0.45
SNX1-210ENST00000560260 BLVRBP30043 206 aaPredicted RBP17.88■□□□□ 0.45
SNX1-210ENST00000560260 RANBP1P43487 201 aa17.88■□□□□ 0.45
SNX1-210ENST00000560260 NEK7Q8TDX7 302 aa17.88■□□□□ 0.45
SNX1-210ENST00000560260 PTX4Q96A99 478 aa17.88■□□□□ 0.45
SNX1-210ENST00000560260 UPRTQ96BW1 309 aa17.88■□□□□ 0.45
SNX1-210ENST00000560260 BCL7BQ9BQE9 202 aa17.88■□□□□ 0.45
SNX1-210ENST00000560260 PCGF1Q9BSM1 259 aa17.88■□□□□ 0.45
SNX1-210ENST00000560260 LINC00312Q9Y6C7 94 aa17.88■□□□□ 0.45
SNX1-210ENST00000560260 TRAV39A0A0B4J263 110 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 hADV38S2A0JD32 116 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 UBE2QL1A1L167 161 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 MCRIP1C9JLW8 97 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 RAB27BO00194 218 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 BLMHQ13867 455 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 PLAC9Q5JTB6 97 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 METTL11BQ5VVY1 283 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 ZNF497Q6ZNH5 498 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 VMO1Q7Z5L0 202 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 OR13A1Q8NGR1 328 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 NEDD4LQ96PU5 975 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 FAAP24Q9BTP7 215 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 SIRT7Q9NRC8 400 aa17.87■□□□□ 0.45
SNX1-210ENST00000560260 M0R1W7 72 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 TOX4O94842 621 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 GLAP06280 429 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 SCAND1P57086 179 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 SLC35E4Q6ICL7 350 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 CROCCP3Q8IVE0 287 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 GAPTQ8N292 157 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 OR56B1Q8NGI3 324 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 CORO2AQ92828 525 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 TNFRSF14Q92956 283 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 ARHGAP5-AS1Q96IT6 56 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 RHBDL2Q9NX52 303 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 ETAA1Q9NY74 926 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 ABRACLQ9P1F3 81 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 LPAR3Q9UBY5 353 aa17.86■□□□□ 0.45
SNX1-210ENST00000560260 ETV7Q9Y603 341 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms