RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 GPR148Q8TDV2 347 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 TOMM40LQ969M1 308 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 RBM14Q96PK6 669 aaKnown RBP10.09□□□□□ -0.79
SNX1-209ENST00000559961 WNT10AQ9GZT5 417 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 METTL9Q9H1A3 318 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 RAB9BQ9NP90 201 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 NECAP2Q9NVZ3 263 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 CKLFQ9UBR5 152 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 ING4Q9UNL4 249 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 IGKV1-12A0A0C4DH73 117 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 MMP23AO75900 390 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 ZFPL1O95159 310 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 HTR3BO95264 441 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 IGKV1D-12P01611 117 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 LPLP06858 475 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 CD24P25063 80 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 CD34P28906 385 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 SOX2P48431 317 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 MADCAM1Q13477 382 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 IL13RA2Q14627 380 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 CCDC58Q4VC31 144 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 LDLRAD2Q5SZI1 272 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 LPCAT4Q643R3 524 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 HIST2H2BDQ6DRA6 164 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 ELP2Q6IA86 826 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 Q6P435 159 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 RPL22L1Q6P5R6 122 aaKnown RBP10.08□□□□□ -0.8
SNX1-209ENST00000559961 SLC16A12Q6ZSM3 486 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 STX19Q8N4C7 294 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 CNIH3Q8TBE1 160 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 NEK7Q8TDX7 302 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 PDCD1LG2Q9BQ51 273 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 NCOR1P1Q9H4R4 102 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 ISG20L2Q9H9L3 353 aaKnown RBP10.08□□□□□ -0.8
SNX1-209ENST00000559961 IDI2-AS1Q9NZ38 188 aa10.08□□□□□ -0.8
SNX1-209ENST00000559961 EBAG9O00559 213 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 ZNF780AO75290 641 aaPredicted RBP10.07□□□□□ -0.8
SNX1-209ENST00000559961 IGLV1-47P01700 117 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 JUNBP17275 347 aaPredicted RBP10.07□□□□□ -0.8
SNX1-209ENST00000559961 GZMHP20718 246 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 DCKP27707 260 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 RAB7AP51149 207 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 LOXL3P58215 753 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 SLC35A2P78381 396 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 ZSCAN26Q16670 478 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 OXLD1Q5BKU9 147 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 KPRPQ5T749 579 aaPredicted RBP10.07□□□□□ -0.8
SNX1-209ENST00000559961 THNSL2Q86YJ6 484 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 OR10A7Q8NGE5 316 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 OR51D1Q8NGF3 324 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 OR51T1Q8NGJ9 327 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 OR52I1Q8NGK6 324 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 DPF1Q92782 380 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 RNF166Q96A37 237 aaPredicted RBP10.07□□□□□ -0.8
SNX1-209ENST00000559961 OCSTAMPQ9BR26 566 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 JAM3Q9BX67 310 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 GPR61Q9BZJ8 451 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 ZNF286AQ9HBT8 521 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 CALYQ9NYX4 217 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 AASSQ9UDR5 926 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 KIF25Q9UIL4 384 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 MOB4Q9Y3A3 225 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 HSPE1-MOB4S4R3N1 261 aa10.07□□□□□ -0.8
SNX1-209ENST00000559961 WNK1Q9H4A3 2382 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 A0A087X0M5 115 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 A0A1B0GX30 115 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 H3BNX3 289 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 J3QR06 171 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 OR7C1O76099 320 aaPredicted RBP10.06□□□□□ -0.8
SNX1-209ENST00000559961 DUS4LO95620 317 aaKnown RBP10.06□□□□□ -0.8
SNX1-209ENST00000559961 TMEM11P17152 192 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 IL3RAP26951 378 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 ZNF93P35789 620 aaPredicted RBP10.06□□□□□ -0.8
SNX1-209ENST00000559961 ZP1P60852 638 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 SLC35B1P78383 322 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 CD83Q01151 205 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 GPR176Q14439 515 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 LTC4SQ16873 150 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 TMEM95Q3KNT9 176 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 LINC00596Q86U02 117 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 COQ2Q96H96 371 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 RDH12Q96NR8 316 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 PPIL3Q9H2H8 161 aaKnown RBP10.06□□□□□ -0.8
SNX1-209ENST00000559961 S100A14Q9HCY8 104 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 TMEM138Q9NPI0 162 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 MRPS18AQ9NVS2 196 aaKnown RBP10.06□□□□□ -0.8
SNX1-209ENST00000559961 ST3GAL6Q9Y274 331 aa10.06□□□□□ -0.8
SNX1-209ENST00000559961 TMEM30CPA0ZSE6 113 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 PSMB11A5LHX3 300 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 GABRPO00591 440 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 IL1AP01583 271 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 PRB2P02812 416 aaPredicted RBP10.05□□□□□ -0.8
SNX1-209ENST00000559961 GABRB1P18505 474 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 BDKRB2P30411 391 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 CDK5R1Q15078 307 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 ATAD3CQ5T2N8 411 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 DDI2Q5TDH0 399 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 Q6ZS46 218 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 OR8H3Q8N146 312 aa10.05□□□□□ -0.8
SNX1-209ENST00000559961 OSR2Q8N2R0 312 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms