RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 CD33P20138 364 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 NFYBP25208 207 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 GLP1RP43220 463 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 CD83Q01151 205 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 CDK5R1Q15078 307 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 RSU1Q15404 277 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 ABCA11PQ4W5N1 156 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 TPTE2P1Q5T6R2 138 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 BAIAP2L2Q6UXY1 529 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 OR52I1Q8NGK6 324 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 TNFAIP8L1Q8WVP5 186 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 SGCDQ92629 289 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 RPEQ96AT9 228 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 NR1H4Q96RI1 486 aaPredicted RBP9.81□□□□□ -0.84
SPG11-219ENST00000559822 ISG20L2Q9H9L3 353 aaKnown RBP9.81□□□□□ -0.84
SPG11-219ENST00000559822 AMBNQ9NP70 447 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 MRPS18AQ9NVS2 196 aaKnown RBP9.81□□□□□ -0.84
SPG11-219ENST00000559822 NECAP2Q9NVZ3 263 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 AASSQ9UDR5 926 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 TSSC4Q9Y5U2 329 aaPredicted RBP9.81□□□□□ -0.84
SPG11-219ENST00000559822 KIAA2026Q5HYC2 2103 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 PRKDCP78527 4128 aaKnown RBP9.8□□□□□ -0.84
SPG11-219ENST00000559822 TCRBV4S1A1TA0A5B7 111 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 PIN1P1O15428 100 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 CLIC3O95833 236 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 LPLP06858 475 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 FAM106CPP0CH98 169 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 CD24P25063 80 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 GDNFP39905 211 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 OR3A4PP47883 348 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 PAX5Q02548 391 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 ZSCAN26Q16670 478 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 C17orf58Q2M2W7 97 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 CCDC58Q4VC31 144 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 OXLD1Q5BKU9 147 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 LPCAT4Q643R3 524 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 RNF144BQ7Z419 303 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 SATL1Q86VE3 508 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 ZNF555Q8NEP9 628 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 CNIH3Q8TBE1 160 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 GPR148Q8TDV2 347 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 TOMM40LQ969M1 308 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 KIRREL1Q96J84 757 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 JAM3Q9BX67 310 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 FAM192AQ9GZU8 254 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 PPIL3Q9H2H8 161 aaKnown RBP9.8□□□□□ -0.84
SPG11-219ENST00000559822 CALYQ9NYX4 217 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 IDI2-AS1Q9NZ38 188 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 KIF25Q9UIL4 384 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 MOB4Q9Y3A3 225 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 HSPE1-MOB4S4R3N1 261 aa9.8□□□□□ -0.84
SPG11-219ENST00000559822 NOTCH3Q9UM47 2321 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 A0A1W2PRX2 142 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 IRGMA1A4Y4 181 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 E9PI62 339 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 LY6LH3BQJ8 138 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 GABRPO00591 440 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 HSPB6O14558 160 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 IL1AP01583 271 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 PF4P02776 101 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 SOX2P48431 317 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 PPP3R1P63098 170 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 MADCAM1Q13477 382 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 ZNF529Q6P280 563 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 RPL22L1Q6P5R6 122 aaKnown RBP9.79□□□□□ -0.84
SPG11-219ENST00000559822 TMPRSS11AQ6ZMR5 421 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 SLC16A12Q6ZSM3 486 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 THNSL2Q86YJ6 484 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 PQLC1Q8N2U9 271 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 OR10A7Q8NGE5 316 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 MRAPQ8TCY5 172 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 RDH12Q96NR8 316 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 S100A13Q99584 98 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 ZNF649Q9BS31 505 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 LINC00574Q9H8X3 128 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 S100A14Q9HCY8 104 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 FGF20Q9NP95 211 aaPredicted RBP9.79□□□□□ -0.84
SPG11-219ENST00000559822 FAM118AQ9NWS6 357 aa9.79□□□□□ -0.84
SPG11-219ENST00000559822 PAK1IP1Q9NWT1 392 aaPredicted RBP9.79□□□□□ -0.84
SPG11-219ENST00000559822 TRAV24A0A0B4J272 114 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 J3QR06 171 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 HTR3BO95264 441 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 DUS4LO95620 317 aaKnown RBP9.78□□□□□ -0.84
SPG11-219ENST00000559822 PRB2P02812 416 aaPredicted RBP9.78□□□□□ -0.84
SPG11-219ENST00000559822 CSTBP04080 98 aaKnown RBP9.78□□□□□ -0.84
SPG11-219ENST00000559822 LIMS3P0CW19 117 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 LIMS4P0CW20 117 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 CGB3P0DN86 165 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 CGB7P0DN87 165 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 DCKP27707 260 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 RAB7AP51149 207 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 LOXL3P58215 753 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 SLC35A2P78381 396 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 MED21Q13503 144 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 C9orf152Q5JTZ5 239 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 ASCL4Q6XD76 172 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 Q6ZPA2 131 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 LINC00596Q86U02 117 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 OR8H3Q8N146 312 aa9.78□□□□□ -0.84
SPG11-219ENST00000559822 WFDC9Q8NEX5 89 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms