RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 MYDGFQ969H8 173 aa16.33■□□□□ 0.2
TSPAN3-206ENST00000559373 KIRREL1Q96J84 757 aa16.33■□□□□ 0.2
TSPAN3-206ENST00000559373 GPER1Q99527 375 aa16.33■□□□□ 0.2
TSPAN3-206ENST00000559373 LIN7BQ9HAP6 207 aa16.33■□□□□ 0.2
TSPAN3-206ENST00000559373 TAS2R4Q9NYW5 299 aa16.33■□□□□ 0.2
TSPAN3-206ENST00000559373 DHDHQ9UQ10 334 aa16.33■□□□□ 0.2
TSPAN3-206ENST00000559373 COL7A1Q02388 2944 aa16.33■□□□□ 0.2
TSPAN3-206ENST00000559373 TRAV24A0A0B4J272 114 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 A0A1W2PPE3 182 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 SNTNA6NMZ2 147 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 ZNF729A6NN14 1252 aaPredicted RBP16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 H3BUI4 141 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 GABRPO00591 440 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 CSN2P05814 226 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 GNG10P50151 68 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 SMN1Q16637 294 aaKnown RBP16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 XAF1Q6GPH4 301 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 PARP16Q8N5Y8 322 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 CHST4Q8NCG5 386 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 RHOXF1Q8NHV9 184 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 PLPPR1Q8TBJ4 325 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 TNFAIP8L1Q8WVP5 186 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 RGP1Q92546 391 aaPredicted RBP16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 ORAI1Q96D31 301 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 AKR1E2Q96JD6 320 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 NECAP2Q9NVZ3 263 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 DNAH3Q8TD57 4116 aa16.32■□□□□ 0.2
TSPAN3-206ENST00000559373 KBTBD11-OT1A0A1B0GTJ5 212 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 TMEM212A6NML5 194 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 OR2F2O95006 317 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 CDRT1O95170 752 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 HTR3BO95264 441 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 FADS2O95864 444 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 MPIG6BO95866 241 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 RPSAP08865 295 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 CEACAM3P40198 252 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 MTNR1BP49286 362 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 HNF4GQ14541 408 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 C16orf82Q7Z2V1 217 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 SYS1Q8N2H4 156 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 OR51T1Q8NGJ9 327 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 OR56B4Q8NH76 319 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 CNIH3Q8TBE1 160 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 MRGPRDQ8TDS7 321 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 MRPL48Q96GC5 212 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 CALYQ9NYX4 217 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 OR6C3Q9NZP0 311 aa16.31■□□□□ 0.2
TSPAN3-206ENST00000559373 PF4P02776 101 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 SNRNP70P08621 437 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 CGB3P0DN86 165 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 CGB7P0DN87 165 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 ARHGDIBP52566 201 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 GBX2P52951 348 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 LOXL3P58215 753 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 REC114Q7Z4M0 266 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 ZNF329Q86UD4 541 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 UBALD1Q8TB05 177 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 APH1BQ8WW43 257 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 RPEQ96AT9 228 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 IDI2-AS1Q9NZ38 188 aa16.3■□□□□ 0.2
TSPAN3-206ENST00000559373 A0A087X0M5 115 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 LOC100130705A0A1B0GUX0 176 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 A0A1B0GX30 115 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 J3QR06 171 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 LIMS3P0CW19 117 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 LIMS4P0CW20 117 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 RAB3AP20336 220 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 SSTR5P35346 364 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 MNDAP41218 407 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 HES1Q14469 280 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 RSU1Q15404 277 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 ZFP1Q6P2D0 407 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 DRAM1Q8N682 238 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 OR9G1Q8NH87 305 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 TOMM40LQ969M1 308 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 RBMXL1Q96E39 390 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 NOL4LQ96MY1 436 aaPredicted RBP16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 RHOFQ9HBH0 211 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 FAM118AQ9NWS6 357 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 LINC00527Q9UJ94 153 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 ING4Q9UNL4 249 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 PSG11Q9UQ72 335 aa16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 TSSC4Q9Y5U2 329 aaPredicted RBP16.29■□□□□ 0.2
TSPAN3-206ENST00000559373 MAGEB3O15480 346 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 CCDC159P0C7I6 412 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 ETV1P50549 477 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 RAB40BQ12829 278 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 OR2G6Q5TZ20 316 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 RSBN1Q5VWQ0 802 aaPredicted RBP16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 FAM53AQ6NSI3 398 aaPredicted RBP16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 ZNF565Q8N9K5 539 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 OR4X2Q8NGF9 303 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 OR13C5Q8NGS8 318 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 Q96MT0 163 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 C9orf16Q9BUW7 83 aa16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 SIRT4Q9Y6E7 314 aaPredicted RBP16.28■□□□□ 0.2
TSPAN3-206ENST00000559373 ALX3O95076 343 aa16.27■□□□□ 0.2
TSPAN3-206ENST00000559373 C21orf33P30042 268 aaPredicted RBP16.27■□□□□ 0.2
TSPAN3-206ENST00000559373 ELP2Q6IA86 826 aa16.27■□□□□ 0.2
TSPAN3-206ENST00000559373 C18orf65Q6ZTR6 163 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms