RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 RBM11P57052 281 aaKnown RBP8.85□□□□□ -0.99
SPG11-216ENST00000559347 PROK1P58294 105 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 BDH1Q02338 343 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 PAX5Q02548 391 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 SRSF4Q08170 494 aaKnown RBP8.85□□□□□ -0.99
SPG11-216ENST00000559347 DYNC1I2Q13409 638 aaKnown RBP8.85□□□□□ -0.99
SPG11-216ENST00000559347 PLA1AQ53H76 456 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 PAN3Q58A45 887 aaKnown RBP8.85□□□□□ -0.99
SPG11-216ENST00000559347 C6orf141Q5SZD1 244 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 RNLSQ5VYX0 342 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 BRICD5Q6PL45 260 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 BAIAP2L2Q6UXY1 529 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 HEPN1Q6WQI6 88 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 LIAT1Q6ZQX7 453 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 OR4P4Q8NGL7 312 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 PLPPR1Q8TBJ4 325 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 MALSU1Q96EH3 234 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 DERL3Q96Q80 235 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 NR1H4Q96RI1 486 aaPredicted RBP8.85□□□□□ -0.99
SPG11-216ENST00000559347 CITED1Q99966 193 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 MND1Q9BWT6 205 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 ING3Q9NXR8 418 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 ZNF581Q9P0T4 197 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 ERGIC3Q9Y282 383 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 LSM2Q9Y333 95 aaKnown RBP8.85□□□□□ -0.99
SPG11-216ENST00000559347 TET2Q6N021 2002 aaPredicted RBP8.85□□□□□ -0.99
SPG11-216ENST00000559347 FAM172BPA6NC97 362 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 ZNF729A6NN14 1252 aaPredicted RBP8.84□□□□□ -0.99
SPG11-216ENST00000559347 MYF6P23409 242 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 GLP1RP43220 463 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 KRTAP10-3P60369 221 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 SLC35A2P78381 396 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 FAM189A2Q15884 450 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 SSX2Q16385 188 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 C17orf58Q2M2W7 97 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 MINOS1Q5TGZ0 78 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 RSBN1Q5VWQ0 802 aaPredicted RBP8.84□□□□□ -0.99
SPG11-216ENST00000559347 OR52W1Q6IF63 320 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 LINC00596Q86U02 117 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 OSR2Q8N2R0 312 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 SGCDQ92629 289 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 THRSPQ92748 146 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 CDCA4Q9BXL8 241 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 ANKRD60Q9BZ19 345 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 METTL9Q9H1A3 318 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 RANBP3Q9H6Z4 567 aaPredicted RBP8.84□□□□□ -0.99
SPG11-216ENST00000559347 IFT22Q9H7X7 185 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 RAB18Q9NP72 206 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 OR6C3Q9NZP0 311 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 KIF25Q9UIL4 384 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 FOXJ3Q9UPW0 622 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 TCF19Q9Y242 345 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 ST3GAL6Q9Y274 331 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 MINOS1-NBL1R4GNA1 71 aa8.84□□□□□ -0.99
SPG11-216ENST00000559347 A0A087X0M5 115 aa8.83□□□□□ -1
SPG11-216ENST00000559347 A0A1B0GX30 115 aa8.83□□□□□ -1
SPG11-216ENST00000559347 A0A1W2PP11 408 aa8.83□□□□□ -1
SPG11-216ENST00000559347 A0A1W2PPK0 400 aa8.83□□□□□ -1
SPG11-216ENST00000559347 GEMIN2O14893 280 aaKnown RBP8.83□□□□□ -1
SPG11-216ENST00000559347 PIN1P1O15428 100 aa8.83□□□□□ -1
SPG11-216ENST00000559347 ZNF780AO75290 641 aaPredicted RBP8.83□□□□□ -1
SPG11-216ENST00000559347 OR7C1O76099 320 aaPredicted RBP8.83□□□□□ -1
SPG11-216ENST00000559347 IGLV1-47P01700 117 aa8.83□□□□□ -1
SPG11-216ENST00000559347 CSTBP04080 98 aaKnown RBP8.83□□□□□ -1
SPG11-216ENST00000559347 MAS1P04201 325 aa8.83□□□□□ -1
SPG11-216ENST00000559347 JUNBP17275 347 aaPredicted RBP8.83□□□□□ -1
SPG11-216ENST00000559347 MAPK3P27361 379 aaPredicted RBP8.83□□□□□ -1
SPG11-216ENST00000559347 CD34P28906 385 aa8.83□□□□□ -1
SPG11-216ENST00000559347 KCNJ3P48549 501 aa8.83□□□□□ -1
SPG11-216ENST00000559347 DYNLT3P51808 116 aa8.83□□□□□ -1
SPG11-216ENST00000559347 SLC35E4Q6ICL7 350 aa8.83□□□□□ -1
SPG11-216ENST00000559347 RTN4RL2Q86UN3 420 aa8.83□□□□□ -1
SPG11-216ENST00000559347 LYPD6Q86Y78 171 aa8.83□□□□□ -1
SPG11-216ENST00000559347 ABHD12Q8N2K0 398 aa8.83□□□□□ -1
SPG11-216ENST00000559347 JAGN1Q8N5M9 183 aa8.83□□□□□ -1
SPG11-216ENST00000559347 NKAIN3Q8N8D7 197 aa8.83□□□□□ -1
SPG11-216ENST00000559347 OR4C13Q8NGP0 309 aa8.83□□□□□ -1
SPG11-216ENST00000559347 OR13A1Q8NGR1 328 aa8.83□□□□□ -1
SPG11-216ENST00000559347 NDNFQ8TB73 568 aa8.83□□□□□ -1
SPG11-216ENST00000559347 MYDGFQ969H8 173 aa8.83□□□□□ -1
SPG11-216ENST00000559347 MUL1Q969V5 352 aa8.83□□□□□ -1
SPG11-216ENST00000559347 KIRREL1Q96J84 757 aa8.83□□□□□ -1
SPG11-216ENST00000559347 OR5M11Q96RB7 305 aa8.83□□□□□ -1
SPG11-216ENST00000559347 S100A13Q99584 98 aa8.83□□□□□ -1
SPG11-216ENST00000559347 NCOR1P1Q9H4R4 102 aa8.83□□□□□ -1
SPG11-216ENST00000559347 ZNF286AQ9HBT8 521 aa8.83□□□□□ -1
SPG11-216ENST00000559347 ABCB10Q9NRK6 738 aa8.83□□□□□ -1
SPG11-216ENST00000559347 SCN3BQ9NY72 215 aa8.83□□□□□ -1
SPG11-216ENST00000559347 ING4Q9UNL4 249 aa8.83□□□□□ -1
SPG11-216ENST00000559347 MRPS28Q9Y2Q9 187 aaKnown RBP8.83□□□□□ -1
SPG11-216ENST00000559347 MEIKINA0A087WXM9 373 aa8.82□□□□□ -1
SPG11-216ENST00000559347 KBTBD11-OT1A0A1B0GTJ5 212 aa8.82□□□□□ -1
SPG11-216ENST00000559347 A6NDX4 124 aa8.82□□□□□ -1
SPG11-216ENST00000559347 PTGES3LE9PB15 166 aa8.82□□□□□ -1
SPG11-216ENST00000559347 F2RL2O00254 374 aa8.82□□□□□ -1
SPG11-216ENST00000559347 IL1AP01583 271 aa8.82□□□□□ -1
SPG11-216ENST00000559347 CGB3P0DN86 165 aa8.82□□□□□ -1
SPG11-216ENST00000559347 CGB7P0DN87 165 aa8.82□□□□□ -1
SPG11-216ENST00000559347 HTR1DP28221 377 aa8.82□□□□□ -1
SPG11-216ENST00000559347 GABRA5P31644 462 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms