RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MPV17LQ2QL34 196 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 TIMM50Q3ZCQ8 353 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 RAB12Q6IQ22 244 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 FAM53AQ6NSI3 398 aaPredicted RBP8.94□□□□□ -0.98
TPM1-217ENST00000559108 FIP1L1Q6UN15 594 aaKnown RBP8.94□□□□□ -0.98
TPM1-217ENST00000559108 OR2W3Q7Z3T1 314 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 C6orf201Q7Z4U5 140 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 PNKDQ8N490 385 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 OR13A1Q8NGR1 328 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 TNFRSF14Q92956 283 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 MRPS24Q96EL2 167 aaKnown RBP8.94□□□□□ -0.98
TPM1-217ENST00000559108 S100A13Q99584 98 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 C7orf69Q9H7B7 122 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 KIF25Q9UIL4 384 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 KCNK7Q9Y2U2 307 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 TRBV23-1A0A0A0MS06 115 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 ODAMA1E959 279 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 RAB27BO00194 218 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 MGST3O14880 152 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 ECDO95905 644 aaPredicted RBP8.93□□□□□ -0.98
TPM1-217ENST00000559108 CSN2P05814 226 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 HOXB4P17483 251 aaPredicted RBP8.93□□□□□ -0.98
TPM1-217ENST00000559108 RPL31P62899 125 aaKnown RBP8.93□□□□□ -0.98
TPM1-217ENST00000559108 GPR176Q14439 515 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 C17orf58Q2M2W7 97 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 ATAD3CQ5T2N8 411 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 IDNKQ5T6J7 187 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 FOXB2Q5VYV0 432 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 CD276Q5ZPR3 534 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 GDPD3Q7L5L3 318 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 VMO1Q7Z5L0 202 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 BCL6BQ8N143 479 aaPredicted RBP8.93□□□□□ -0.98
TPM1-217ENST00000559108 GAPTQ8N292 157 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 CHST4Q8NCG5 386 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 KCNG3Q8TAE7 436 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 UBALD1Q8TB05 177 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 SLC25A46Q96AG3 418 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 UPRTQ96BW1 309 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 WDFY2Q96P53 400 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 HDHD3Q9BSH5 251 aaPredicted RBP8.93□□□□□ -0.98
TPM1-217ENST00000559108 CST11Q9H112 138 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 DCSTAMPQ9H295 470 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 SIRT7Q9NRC8 400 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 TMEM160Q9NX00 188 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 ONECUT1Q9UBC0 465 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 SCOCQ9UIL1 159 aa8.93□□□□□ -0.98
TPM1-217ENST00000559108 ELF5Q9UKW6 265 aaPredicted RBP8.93□□□□□ -0.98
TPM1-217ENST00000559108 TRAV40A0A0B4J280 105 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 A0A1W2PQ09 198 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 UBE2QL1A1L167 161 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 C17orf98A8MV24 154 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 RNASEK-C17orf49H0YIS7 233 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 H3BMQ9 156 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 J3QLI3 93 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 GPR37O15354 613 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 PDCD6O75340 191 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 CRLF1O75462 422 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 IL1AP01583 271 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 LIPFP07098 398 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 ERP29P30040 261 aaKnown RBP8.92□□□□□ -0.98
TPM1-217ENST00000559108 VEGFCP49767 419 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 PSMD7P51665 324 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 PAX5Q02548 391 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 TUSC1Q2TAM9 212 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 KRBOX4Q5JUW0 171 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 NKAPLQ5M9Q1 402 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 LDLRAD2Q5SZI1 272 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 RUSC1-AS1Q66K80 236 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 ZNF497Q6ZNH5 498 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 LINC00596Q86U02 117 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 PDZD9Q8IXQ8 264 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 ISOC1Q96CN7 298 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 ARHGAP5-AS1Q96IT6 56 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 PCGF1Q9BSM1 259 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 FAAP24Q9BTP7 215 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 MRI1Q9BV20 369 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 PEX16Q9Y5Y5 336 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 AUP1Q9Y679 476 aa8.92□□□□□ -0.98
TPM1-217ENST00000559108 SETD2Q9BYW2 2564 aaPredicted RBP8.92□□□□□ -0.98
TPM1-217ENST00000559108 NAV3Q8IVL0 2385 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 CENPVL3A0A0U1RRI6 287 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 MDFIC2A0A1B0GVS7 189 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A10PA6NDY2 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A18PA6NE21 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A16PA6NEW6 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A20PA6NIJ5 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A8PA6NJQ4 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A7PA6NKC0 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A22PA8MWA6 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A12PA8MX19 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A5PA8MXJ8 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A23PA8MXZ1 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 TOX4O94842 621 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 MT-ND4P03905 459 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A15PP0C7V4 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A13PP0C7W8 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A14PP0C7W9 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 FAM90A24PP0C7X0 464 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 RAB6AP20340 208 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 OMGP23515 440 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms