RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 IGKV2D-28P01615 120 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 HLA-AP01891 365 aaKnown RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 S100A6P06703 90 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 CD99P14209 185 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 MUC1P15941 1255 aaPredicted RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 HIST1H1CP16403 213 aaKnown RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 CFL1P23528 166 aaKnown RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 ELK4P28324 431 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 EMP2P54851 167 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 MP68P56378 58 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 CLDN12P56749 244 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 RAB2AP61019 212 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 UBE2IP63279 158 aaKnown RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 ELF3P78545 371 aaPredicted RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 SMAGPQ0VAQ4 97 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 ZNF816Q0VGE8 651 aaPredicted RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 FUT5Q11128 374 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 MED21Q13503 144 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 C1DQ13901 141 aaKnown RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 TBC1D28Q2M2D7 210 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 ZNF678Q5SXM1 525 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 ELP2Q6IA86 826 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 DRAM2Q6UX65 266 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 TCF23Q7RTU1 214 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 DPPA2Q7Z7J5 298 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 DAZ4Q86SG3 579 aaKnown RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 MIR7-3HGQ8N6C7 128 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 DNAAF3Q8N9W5 541 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 OR52N1Q8NH53 320 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 CLDN23Q96B33 292 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 CYYR1Q96J86 154 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 OLFM3Q96PB7 478 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 ZNF717Q9BY31 904 aaPredicted RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 UGT2B28Q9BY64 529 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 POTEKPQ9BYX7 375 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 BCL2L14Q9BZR8 327 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 CHST5Q9GZS9 411 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 ARL6Q9H0F7 186 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 DAZ1Q9NQZ3 744 aaKnown RBP1.44□□□□□ -2.18
GABPB1-209ENST00000559100 INIPQ9NRY2 104 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 FGFR1OP2Q9NVK5 253 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 TMEM38BQ9NVV0 291 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 GLS2Q9UI32 602 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 NAGKQ9UJ70 344 aa1.44□□□□□ -2.18
GABPB1-209ENST00000559100 NUP214P35658 2090 aaPredicted RBP1.43□□□□□ -2.18
GABPB1-209ENST00000559100 TRAV40A0A0B4J280 105 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 MYBPHLA2RUH7 354 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 TMEM150BA6NC51 233 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 IZUMO1RA6ND01 250 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 B4DEV8 164 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 F5H5T6 163 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 H0Y980 276 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 K7EQS6 105 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 M0QYV0 167 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 M0QZ92 97 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 MFNGO00587 321 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 SLC31A1O15431 190 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 CNMDO75829 334 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 KCNK2O95069 426 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 CDRT1O95170 752 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 WISP3O95389 354 aaPredicted RBP1.43□□□□□ -2.18
GABPB1-209ENST00000559100 IGKV3-11P04433 115 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 COX5BP10606 129 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 GTF2F2P13984 249 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 NTF3P20783 257 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 PSMA1P25786 263 aaKnown RBP1.43□□□□□ -2.18
GABPB1-209ENST00000559100 COILP38432 576 aaPredicted RBP1.43□□□□□ -2.18
GABPB1-209ENST00000559100 IFNGR2P38484 337 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 MPV17P39210 176 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 RPL14P50914 215 aaKnown RBP1.43□□□□□ -2.18
GABPB1-209ENST00000559100 GABARAPL2P60520 117 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 MYL6P60660 151 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 FAM3AP98173 230 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 EBI3Q14213 229 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 ZNF235Q14590 738 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 PAFAH1B3Q15102 231 aaKnown RBP1.43□□□□□ -2.18
GABPB1-209ENST00000559100 HLA-DRB5Q30154 266 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 LCE3CQ5T5A8 94 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 FAM162BQ5T6X4 162 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 OGFRL1Q5TC84 451 aaPredicted RBP1.43□□□□□ -2.18
GABPB1-209ENST00000559100 FAM222AQ5U5X8 452 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 SLC25A34Q6PIV7 304 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 FAM131AQ6UXB0 335 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 CASP12Q6UXS9 341 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 UNQ9165/PRO28630Q6UXU0 137 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 SPNS3Q6ZMD2 512 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 PAGE2Q7Z2X7 111 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 TMEM144Q7Z5S9 345 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 ZBTB8OSQ8IWT0 167 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 SGPP2Q8IWX5 399 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 MUC15Q8N387 334 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 SLC25A45Q8N413 288 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 ZNF555Q8NEP9 628 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 OR8A1Q8NGG7 326 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 OR5D18Q8NGL1 313 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 OR11L1Q8NGX0 322 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 ITLN2Q8WWU7 325 aaPredicted RBP1.43□□□□□ -2.18
GABPB1-209ENST00000559100 ESR2Q92731 530 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 PPP1R14BQ96C90 147 aa1.43□□□□□ -2.18
GABPB1-209ENST00000559100 KCTD7Q96MP8 289 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms