RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 NAA50Q9GZZ1 169 aaKnown RBP9.35□□□□□ -0.91
SNX1-204ENST00000559061 LPAR5Q9H1C0 372 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 ESM1Q9NQ30 184 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 FBLN5Q9UBX5 448 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 NUP50Q9UKX7 468 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 V9GY05 133 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 TRAV39A0A0B4J263 110 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 LOC100506127A0A0U1RQW1 187 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 TMEM272A0A1B0GTI8 110 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 A0A1W2PQ09 198 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 ODAMA1E959 279 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 IFITM5A6NNB3 132 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 ZNF780AO75290 641 aaPredicted RBP9.34□□□□□ -0.91
SNX1-204ENST00000559061 CRTAPO75718 401 aaPredicted RBP9.34□□□□□ -0.91
SNX1-204ENST00000559061 OR7C1O76099 320 aaPredicted RBP9.34□□□□□ -0.91
SNX1-204ENST00000559061 BPNT1O95861 308 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 MPIG6BO95866 241 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 CSTBP04080 98 aaKnown RBP9.34□□□□□ -0.91
SNX1-204ENST00000559061 HNF1AP20823 631 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 PRTN3P24158 256 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 CHATP28329 748 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 SDC2P34741 201 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 SRP14P37108 136 aaKnown RBP9.34□□□□□ -0.91
SNX1-204ENST00000559061 RAB11BQ15907 218 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 C17orf58Q2M2W7 97 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 PAN3Q58A45 887 aaKnown RBP9.34□□□□□ -0.91
SNX1-204ENST00000559061 METTL11BQ5VVY1 283 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 C1orf122Q6ZSJ8 110 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 GDPD3Q7L5L3 318 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 C5orf24Q7Z6I8 188 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 LINC00596Q86U02 117 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 GAPTQ8N292 157 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 OR51D1Q8NGF3 324 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 OR5D13Q8NGL4 314 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 OR13A1Q8NGR1 328 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 C17orf50Q8WW18 174 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 CORO2AQ92828 525 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 LHX4Q969G2 390 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 MRPS24Q96EL2 167 aaKnown RBP9.34□□□□□ -0.91
SNX1-204ENST00000559061 FUNDC2Q9BWH2 189 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 SLITRK2Q9H156 845 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 ING3Q9NXR8 418 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 GHRLQ9UBU3 117 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 KIF25Q9UIL4 384 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 LINC00312Q9Y6C7 94 aa9.34□□□□□ -0.91
SNX1-204ENST00000559061 IGHV1-69DA0A0B4J2H0 117 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 AIPO00170 330 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 VENTXO95231 258 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 IGHV1-69P01742 117 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 UBBP0CG47 229 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 ZNF728P0DKX0 622 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 RAB3BP20337 219 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 MYL9P24844 172 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 MEF2CQ06413 473 aaPredicted RBP9.33□□□□□ -0.92
SNX1-204ENST00000559061 GPR176Q14439 515 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 C2orf76Q3KRA6 126 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 MOGAT2Q3SYC2 334 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 KRBOX4Q5JUW0 171 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 FAM53AQ6NSI3 398 aaPredicted RBP9.33□□□□□ -0.92
SNX1-204ENST00000559061 ZNF782Q6ZMW2 699 aaPredicted RBP9.33□□□□□ -0.92
SNX1-204ENST00000559061 OR2W3Q7Z3T1 314 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 FAM89BQ8N5H3 189 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 FAM3DQ96BQ1 224 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 SULT4A1Q9BR01 284 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 MRPS26Q9BYN8 205 aaKnown RBP9.33□□□□□ -0.92
SNX1-204ENST00000559061 PLGRKTQ9HBL7 147 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 STEAP1Q9UHE8 339 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 GLS2Q9UI32 602 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 SSR3Q9UNL2 185 aa9.33□□□□□ -0.92
SNX1-204ENST00000559061 A0A1W2PRD5 423 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 A0A1W2PRF3 423 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 A0A1W2PRM7 423 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A10PA6NDY2 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A18PA6NE21 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A16PA6NEW6 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A20PA6NIJ5 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A8PA6NJQ4 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A7PA6NKC0 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A22PA8MWA6 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A12PA8MX19 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A5PA8MXJ8 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A23PA8MXZ1 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 SOCS1O15524 211 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A15PP0C7V4 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A13PP0C7W8 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A14PP0C7W9 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 FAM90A24PP0C7X0 464 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 IGHV1-8P0DP01 117 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 TMEM50BP56557 158 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 NCS1P62166 190 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 LSM3P62310 102 aaKnown RBP9.32□□□□□ -0.92
SNX1-204ENST00000559061 CTF1Q16619 201 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 PLAC9Q5JTB6 97 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 PRAMEF5Q5TYX0 476 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 OLFML2AQ68BL7 652 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 RAB12Q6IQ22 244 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 ZNF497Q6ZNH5 498 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 ZDHHC22Q8N966 263 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 KCTD7Q96MP8 289 aa9.32□□□□□ -0.92
SNX1-204ENST00000559061 ZNF714Q96N38 554 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms