RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 POC1AQ8NBT0 407 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 MRPL30Q8TCC3 161 aaKnown RBP10.94□□□□□ -0.66
SMAD3-207ENST00000558763 WFIKKN1Q96NZ8 548 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 ZNF286AQ9HBT8 521 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 Q9N2K0 584 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 NECAP2Q9NVZ3 263 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 SLC23A1Q9UHI7 598 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 HSPB11Q9Y547 144 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 ANKHD1Q8IWZ3 2542 aaKnown RBP10.94□□□□□ -0.66
SMAD3-207ENST00000558763 IGLV3-9A0A075B6K5 115 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 TRBV6-6A0A0A6YYG2 114 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 ATP6V1G2-DDX39BF2Z307 99 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 HSPB6O14558 160 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 SLC22A5O76082 557 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 PTBP3O95758 552 aaKnown RBP10.94□□□□□ -0.66
SMAD3-207ENST00000558763 THBDP07204 575 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 GLRA1P23415 457 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 CD34P28906 385 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 GLRXP35754 106 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 IL13RA1P78552 427 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 HERPUD1Q15011 391 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 PRAMEF6Q5VXH4 476 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 ZNF880Q6PDB4 577 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 Q8IYB0 196 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 UXS1Q8NBZ7 420 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 LINC01560Q8TB33 94 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 TMPRSS13Q9BYE2 586 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 CXXC4Q9H2H0 198 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 SPACA1Q9HBV2 294 aa10.94□□□□□ -0.66
SMAD3-207ENST00000558763 HCFC1P51610 2035 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 IGHV3-13P01766 116 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 CRYAAP02489 173 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 GLAP06280 429 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 GRPP07492 148 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 GCH1P30793 250 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 RBMXP38159 391 aaKnown RBP10.93□□□□□ -0.66
SMAD3-207ENST00000558763 SRSF1Q07955 248 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMAD3-207ENST00000558763 LGALSLQ3ZCW2 172 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-207ENST00000558763 LIN54Q6MZP7 749 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 WDR82Q6UXN9 313 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 GAPTQ8N292 157 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 RDH5Q92781 318 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 USB1Q9BQ65 265 aaKnown RBP10.93□□□□□ -0.66
SMAD3-207ENST00000558763 DPCDQ9BVM2 203 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-207ENST00000558763 ROS1P08922 2347 aa10.93□□□□□ -0.66
SMAD3-207ENST00000558763 IGKV1-6A0A0C4DH72 117 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 PLSCR5A0PG75 271 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 ZSCAN5BA6NJL1 495 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 J3QKU1 62 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 SLC33A1O00400 549 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-207ENST00000558763 WNT9BO14905 357 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 SFT2D2O95562 160 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 VAMP1P23763 118 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 CD40P25942 277 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 SORDQ00796 357 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 IGSF11Q5DX21 431 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 CLEC18BQ6UXF7 455 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 ASCC1Q8N9N2 400 aaKnown RBP10.92□□□□□ -0.66
SMAD3-207ENST00000558763 PAIP2BQ9ULR5 123 aaKnown RBP10.92□□□□□ -0.66
SMAD3-207ENST00000558763 CACNA1DQ01668 2161 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 TRAV14DV4A0A0A6YYC5 116 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-207ENST00000558763 TUBAL3A6NHL2 446 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 MCRIP1C9JLW8 97 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 C19orf84I3L1E1 186 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 CCSO14618 274 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 HS3ST1O14792 307 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 OR2H2O95918 312 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 CD8AP01732 235 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 CTSDP07339 412 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-207ENST00000558763 ANKRD55Q3KP44 614 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 SPRNQ5BIV9 151 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 ASB13Q8WXK3 278 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 SCGB3A2Q96PL1 93 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 DHRS9Q9BPW9 319 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 HEXA-AS1Q9H8Q6 139 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 NDRG3Q9UGV2 375 aa10.92□□□□□ -0.66
SMAD3-207ENST00000558763 NXPH2O95156 264 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 SCTP09683 121 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 CD200P41217 278 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 ECI1P42126 302 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 SPIN3Q5JUX0 258 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 SHEQ5VZ18 495 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 LPCAT3Q6P1A2 487 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 SPERTQ8NA61 448 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 PLPPR1Q8TBJ4 325 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 CASTOR1Q8WTX7 329 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 MOB3AQ96BX8 217 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 PHB2Q99623 299 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 GON7Q9BXV9 100 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 SLA2Q9H6Q3 261 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 PRR13Q9NZ81 148 aa10.91□□□□□ -0.66
SMAD3-207ENST00000558763 HELZ2Q9BYK8 2649 aaKnown RBP10.91□□□□□ -0.66
SMAD3-207ENST00000558763 A0A0B4J2A0 478 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-207ENST00000558763 DEGS1O15121 323 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 RGS11O94810 467 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 ZNF44P15621 663 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 FCGR2CP31995 323 aa10.9□□□□□ -0.66
SMAD3-207ENST00000558763 GMFBP60983 142 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms