RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 CDH26Q8IXH8 852 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 OR13A1Q8NGR1 328 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 FAM216AQ8WUB2 273 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 DPCDQ9BVM2 203 aaPredicted RBP11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 SELENOIQ9C0D9 397 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 HEXA-AS1Q9H8Q6 139 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 KIF25Q9UIL4 384 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 FAM96BQ9Y3D0 163 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 LINC00312Q9Y6C7 94 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 ZNF780AO75290 641 aaPredicted RBP11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 CRTAPO75718 401 aaPredicted RBP11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 CALRP27797 417 aaKnown RBP11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 PSMB9P28065 219 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 GABRA5P31644 462 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 C17orf58Q2M2W7 97 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 C1orf100Q5SVJ3 147 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 UBE2UQ5VVX9 321 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 RSBN1Q5VWQ0 802 aaPredicted RBP11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 GLT8D1Q68CQ7 371 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 DYNAPQ8N1N2 210 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 SVOPQ8N4V2 548 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 NKAIN3Q8N8D7 197 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 PHYHIPQ92561 330 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 THRSPQ92748 146 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 UQCC2Q9BRT2 126 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 CHIAQ9BZP6 476 aa11.25□□□□□ -0.61
TSPAN3-205ENST00000558745 MEIKINA0A087WXM9 373 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 hCG_1809904A0A1W2PP81 198 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 A0A1W2PPE2 198 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 A0A1W2PR64 198 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 A0A1W2PRV1 198 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 MRPS14O60783 128 aaKnown RBP11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 MPIG6BO95866 241 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 CSN2P05814 226 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 VSIG8P0DPA2 414 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 CD37P11049 281 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 MGMTP16455 207 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 CDK2P24941 298 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 IER3P46695 156 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 ACTG1P63261 375 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 DYNC1I2Q13409 638 aaKnown RBP11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 GPR176Q14439 515 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 P2RY14Q15391 338 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 TRAM1Q15629 374 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 NHLRC3Q5JS37 347 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 ZNF773Q6PK81 442 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 RFESDQ8TAC1 157 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 CCDC107Q8WV48 283 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 ZFAND2BQ8WV99 257 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 CORO2AQ92828 525 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 SLC25A28Q96A46 364 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 SLITRK2Q9H156 845 aa11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 UBE2J1Q9Y385 318 aaPredicted RBP11.24□□□□□ -0.61
TSPAN3-205ENST00000558745 TRGV10A0A0A0MS01 117 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 FUOMA2VDF0 154 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 RRP9O43818 475 aaKnown RBP11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 IGHV3-7P01780 117 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 ARG1P05089 322 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 CGB3P0DN86 165 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 CGB7P0DN87 165 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 JUNBP17275 347 aaPredicted RBP11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 PSMA1P25786 263 aaKnown RBP11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 HTR2CP28335 458 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 CLDN12P56749 244 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 LTC4SQ16873 150 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 PLA1AQ53H76 456 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 C22orf42Q6IC83 251 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 C16orf87Q6PH81 154 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 C5orf24Q7Z6I8 188 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 RTN4RL2Q86UN3 420 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 MRGPRDQ8TDS7 321 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 NEK7Q8TDX7 302 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 DYRK2Q92630 601 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 FOXRED1Q96CU9 486 aaPredicted RBP11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 BARHL1Q9BZE3 327 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 TMEM133Q9H2Q1 129 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 PCDHB16Q9NRJ7 776 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 NDUFB11Q9NX14 153 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 ZNRD1Q9P1U0 126 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 SESN1Q9Y6P5 492 aa11.23□□□□□ -0.61
TSPAN3-205ENST00000558745 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 UBE2QL1A1L167 161 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 SMIM30A4D0T7 59 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 FAM181BA6NEQ2 426 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 CLDN34H7C241 214 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 CCRL2O00421 344 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 SLC22A1O15245 554 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 ARL6IP5O75915 188 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 CLPXO76031 633 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 PAHP00439 452 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 FBP1P09467 338 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 GLP1RP43220 463 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 RAB13P51153 203 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 OR10A3P58181 314 aa11.22□□□□□ -0.61
TSPAN3-205ENST00000558745 PLA2G7Q13093 441 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms