RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ATP6V1E1P36543 226 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 DDOSTP39656 456 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 HAAOP46952 286 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 PITPNBP48739 271 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 CCR9P51686 369 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 CDC42P60953 191 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 GNB2P62879 340 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 IL5RAQ01344 420 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 RIPPLY1Q0D2K3 151 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 DCTN2Q13561 401 aaKnown RBP3.45□□□□□ -1.86
SPG11-211ENST00000558561 INSL4Q14641 139 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 C2orf68Q2NKX9 166 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 DEFB112Q30KQ8 113 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 CEACAM21Q3KPI0 293 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 BCL2L15Q5TBC7 163 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 OGFRL1Q5TC84 451 aaPredicted RBP3.45□□□□□ -1.86
SPG11-211ENST00000558561 LCN1P1Q5VSP4 162 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 ZNF691Q5VV52 312 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 TEX36Q5VZQ5 186 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 PLCXD3Q63HM9 321 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 STUMQ69YW2 141 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 ACP7Q6ZNF0 438 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 HAPLN4Q86UW8 402 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 COMMD2Q86X83 199 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 TPRX1Q8N7U7 411 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 ZNF485Q8NCK3 441 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 LY6G5BQ8NDX9 201 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 OR5A2Q8NGI9 324 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 OR51A2Q8NGJ7 313 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 OR11L1Q8NGX0 322 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 TMED6Q8WW62 240 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 TRUB1Q8WWH5 349 aaKnown RBP3.45□□□□□ -1.86
SPG11-211ENST00000558561 ASB17Q8WXJ9 295 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 DNAJC9Q8WXX5 260 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 LHX4Q969G2 390 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 SLAMF9Q96A28 289 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 RAB39BQ96DA2 213 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 RAB3IPQ96QF0 476 aaPredicted RBP3.45□□□□□ -1.86
SPG11-211ENST00000558561 MICU1Q9BPX6 476 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 PCGF1Q9BSM1 259 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 C19orf24Q9BVV8 132 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 SIRPDQ9H106 197 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 FN3KRPQ9HA64 309 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 FGF20Q9NP95 211 aaPredicted RBP3.45□□□□□ -1.86
SPG11-211ENST00000558561 SIRT7Q9NRC8 400 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 C19orf12Q9NSK7 152 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 PAK1IP1Q9NWT1 392 aaPredicted RBP3.45□□□□□ -1.86
SPG11-211ENST00000558561 IMPAD1Q9NX62 359 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 SMPD3Q9NY59 655 aaPredicted RBP3.45□□□□□ -1.86
SPG11-211ENST00000558561 CLN8Q9UBY8 286 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 MIOXQ9UGB7 285 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 OR14J1Q9UGF5 321 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 MPC1Q9Y5U8 109 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 AUP1Q9Y679 476 aa3.45□□□□□ -1.86
SPG11-211ENST00000558561 IGKV2D-30A0A075B6S6 120 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 TRAV38-1A0A0B4J264 116 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 PNMA8CA0A1B0GUJ8 204 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 LOC107986453A0A1B0GWG9 222 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 A0A1W2PP11 408 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 ACOD1A6NK06 481 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 OR2AT4A6NND4 320 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 A8MXK9 166 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 RNASEK-C17orf49H0YIS7 233 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 CASQ2O14958 399 aaPredicted RBP3.44□□□□□ -1.86
SPG11-211ENST00000558561 PIN1P1O15428 100 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 SYT7O43581 403 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 SULT1C4O75897 302 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 NDUFB4O95168 129 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 APOC1P02654 83 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 PRSS2P07478 247 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 HTR1AP08908 422 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 PGA5P0DJD9 388 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 PIPP12273 146 aaPredicted RBP3.44□□□□□ -1.86
SPG11-211ENST00000558561 IRF2P14316 349 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 CCL3L1P16619 93 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 HOXB6P17509 224 aaKnown RBP3.44□□□□□ -1.86
SPG11-211ENST00000558561 ATF1P18846 271 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 GLRA1P23415 457 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 PRDX2P32119 198 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 CFHR2P36980 270 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 VHLP40337 213 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 RAB13P51153 203 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 AQP4P55087 323 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 KRTAP10-3P60369 221 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 ERVK11-1P61568 191 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 RPS11P62280 158 aaKnown RBP eCLIP3.44□□□□□ -1.86
SPG11-211ENST00000558561 GNG3P63215 75 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 SLC3A1Q07837 685 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 IL18R1Q13478 541 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 ZNF273Q14593 569 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 CLVS2Q5SYC1 327 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 SLC25A26Q70HW3 274 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 RTN4RL2Q86UN3 420 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 GID4Q8IVV7 300 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 C10orf67Q8IYJ2 551 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 DYNAPQ8N1N2 210 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 DHRSXQ8N5I4 330 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 SPICQ8N5J4 248 aa3.44□□□□□ -1.86
SPG11-211ENST00000558561 ACBD7Q8N6N7 88 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms