RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PSG11Q9UQ72 335 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 WDR38Q5JTN6 314 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 KIAA0895LQ68EN5 471 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 RNASE1P07998 156 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 GCSAMLQ5JQS6 135 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF788Q6ZQV5 615 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 DMRTC2Q8IXT2 367 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 OR10AC1Q8NH08 325 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 A0A1W2PN81 502 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 GRIFINA4D1Z8 144 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 PLPP1O14494 284 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 TMEM256Q8N2U0 113 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ABHD3Q8WU67 409 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 MRPS17Q9Y2R5 130 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 LILRA1O75019 489 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CD22P20273 847 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 OR6X1Q8NH79 312 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ULBP2Q9BZM5 246 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CHRNA10Q9GZZ6 450 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 NANOS3P60323 173 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 GALNT14Q96FL9 552 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CALHM1Q8IU99 346 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 EAF1Q96JC9 268 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 NEU3Q9UQ49 428 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CFIP05156 583 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 BMI1P35226 326 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 G6PCP35575 357 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ZIC1Q15915 447 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ANAPC13Q9BS18 74 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 P4HTMQ9NXG6 502 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 DHHO43323 396 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 FOXL2P58012 376 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 OCC1Q8TAD7 63 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BLQ99880 126 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ARR3P36575 388 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 OR8B8Q15620 311 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 NT5CQ8TCD5 201 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 KLHDC3Q9BQ90 382 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 KIAA1210Q9ULL0 1709 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 MED13Q9UHV7 2174 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 A0A1W2PRS3 328 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 BCL2P10415 239 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 A8MWL6 223 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 MT-CO3P00414 261 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 B4GALNT1Q00973 533 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 PRNTQ86SH4 94 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 ABHD12Q8N2K0 398 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 POC1AQ8NBT0 407 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 SDF2L1Q9HCN8 221 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 ST6GALNAC2Q9UJ37 374 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 COL17A1Q9UMD9 1497 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 KLF7O75840 302 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 IGHV3-13P01766 116 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 IGHV3-7P01780 117 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HYAL1Q12794 435 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 CST6Q15828 149 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 ST6GALNAC6Q969X2 333 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 RCC1LQ96I51 464 aaKnown RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 SLC17A4Q9Y2C5 497 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 C9JQL5 133 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 INSM1Q01101 510 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 FAM78AQ5JUQ0 283 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 CNRIP1Q96F85 164 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 TMEM106BQ9NUM4 274 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 SHROOM2Q13796 1616 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 PRSS47A8MTI9 375 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 OR10S1Q8NGN2 331 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 VCX2Q9H322 139 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 C5orf66Q9H5L9 145 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 CITO14578 2027 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF217O75362 1048 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 VDAC1P21796 283 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 OR3A4PP47883 348 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 CD300EQ496F6 205 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 GAGE13Q4V321 117 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 LDLRAD2Q5SZI1 272 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 LYRM7Q5U5X0 104 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 KCNK15Q9H427 330 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 A0A1W2PRD5 423 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 A0A1W2PRF3 423 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 A0A1W2PRM7 423 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BKO60814 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BJP06899 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BOP23527 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BBP33778 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BDP58876 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BCP62807 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST2H2BEQ16778 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 OR4A4PQ8NGN8 299 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BHQ93079 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BNQ99877 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H2BMQ99879 126 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 CYTL1Q9NRR1 136 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 CD1AP06126 327 aa3.24□□□□□ -1.89
ATXN3-248ENST00000558190 HOXA4Q00056 320 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-248ENST00000558190 MEF2CQ06413 473 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms