RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TAS2R1Q9NYW7 299 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 OR6C3Q9NZP0 311 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 MAGEL2Q9UJ55 1249 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 IKZF2Q9UKS7 526 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 GTF2A1LQ9UNN4 478 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 VSIG4Q9Y279 399 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 KLHDC2Q9Y2U9 406 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 SNX5Q9Y5X3 404 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 U3KQV3 271 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 V9GYS6 101 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 TRBV2A0A0J9YWF9 115 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 A0A1B0GTI1 187 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 KBTBD11-OT1A0A1B0GTJ5 212 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 A0A1W2PPI3 338 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 ODAMA1E959 279 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 MAGEA13PA6NCF6 341 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 BOLA2-SMG1P6H3BVE0 249 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 DEGS1O15121 323 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 GATBO75879 557 aaKnown RBP4.02□□□□□ -1.77
SPG11-208ENST00000558155 OR8U9P0C7N5 309 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 IGHV4-30-4P0DP06 118 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 PRKACAP17612 351 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 BCL3P20749 454 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 PSMB8P28062 276 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 C21orf33P30042 268 aaPredicted RBP4.02□□□□□ -1.77
SPG11-208ENST00000558155 SOX6P35712 828 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 KIR3DL2P43630 455 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 OR3A1P47881 315 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 NPBWR2P48146 333 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 MTNR1BP49286 362 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 RBP2P50120 134 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 ZP1P60852 638 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 ROM1Q03395 351 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 SCN1BQ07699 218 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 GINS1Q14691 196 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 UBE2V2Q15819 145 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 C17orf58Q2M2W7 97 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 KRBOX4Q5JUW0 171 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 BCL2L15Q5TBC7 163 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 CD300LDQ6UXZ3 194 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 Q6ZSR3 168 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 MOB3BQ86TA1 216 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 LYPD6Q86Y78 171 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 PGAM4Q8N0Y7 254 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 Q8N1Y9 231 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 IQCF1Q8N6M8 205 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 ZNF491Q8N8L2 437 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 CHST4Q8NCG5 386 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 CCDC54Q8NEL0 328 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 OR8H1Q8NGG4 311 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 OR10X1Q8NGY0 326 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 DDB2Q92466 427 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 CMTM5Q96DZ9 223 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 KCTD7Q96MP8 289 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 S1PR3Q99500 378 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 ELOVL1Q9BW60 279 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 TEX12Q9BXU0 123 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 OR51J1Q9H342 316 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 MOB1AQ9H8S9 216 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 PLEKHA1Q9HB21 404 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 RBFOX1Q9NWB1 397 aaKnown RBP4.02□□□□□ -1.77
SPG11-208ENST00000558155 ING3Q9NXR8 418 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 IDI2-AS1Q9NZ38 188 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 ZNF580Q9UK33 172 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 OR52A1Q9UKL2 312 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 PSG11Q9UQ72 335 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 GSTK1Q9Y2Q3 226 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 TNCP24821 2201 aa4.02□□□□□ -1.77
SPG11-208ENST00000558155 IGKV1-27A0A075B6S5 117 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 IGHV1-3A0A0C4DH29 117 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 LINC00854A0A1B0GVQ3 168 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 LINC01619G3V211 115 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 I3L521 148 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 ARPC1BO15143 372 aaKnown RBP4.01□□□□□ -1.77
SPG11-208ENST00000558155 HSPA12AO43301 675 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 SYT7O43581 403 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 ENTPD6O75354 484 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 B3GALNT1O75752 331 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 OR2H2O95918 312 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 MOSP00540 346 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 IGF1P05019 195 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 CSN2P05814 226 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 CGB3P0DN86 165 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 CGB7P0DN87 165 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 CALCBP10092 127 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 HSD17B1P14061 328 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 ZNF44P15621 663 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 ARSBP15848 533 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 PRKACBP22694 351 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 CD1BP29016 333 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 RAB9AP51151 201 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 SNU13P55769 128 aaKnown RBP4.01□□□□□ -1.77
SPG11-208ENST00000558155 MTCP1P56278 107 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 CFHR3Q02985 330 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 MFGE8Q08431 387 aaPredicted RBP4.01□□□□□ -1.77
SPG11-208ENST00000558155 ZNF816Q0VGE8 651 aaPredicted RBP4.01□□□□□ -1.77
SPG11-208ENST00000558155 PPP1R8Q12972 351 aaKnown RBP4.01□□□□□ -1.77
SPG11-208ENST00000558155 PDZK1IP1Q13113 114 aa4.01□□□□□ -1.77
SPG11-208ENST00000558155 APOFQ13790 326 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms