RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 GADD45AP24522 165 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 PAX5Q02548 391 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 GUCA2AQ02747 115 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 RBM39Q14498 530 aaKnown RBP13.74□□□□□ -0.21
PBX4-202ENST00000557978 NCR3LG1Q68D85 454 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 OR2W3Q7Z3T1 314 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 TRAPPC6BQ86SZ2 158 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 SUMF2Q8NBJ7 301 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 SLC25A28Q96A46 364 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 NCOR1P1Q9H4R4 102 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 OCEL1Q9H607 264 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 ATRQ13535 2644 aa13.74□□□□□ -0.21
PBX4-202ENST00000557978 SHISA3A0PJX4 238 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 IFITM5A6NNB3 132 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 C17orf98A8MV24 154 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 TMEM14DPA8MWL7 114 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 MCRIP1C9JLW8 97 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 CCL3L1P16619 93 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 GLIPR1P48060 266 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 C9orf139Q6ZV77 190 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 OR51D1Q8NGF3 324 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 NEK7Q8TDX7 302 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 ZNF418Q8TF45 676 aaPredicted RBP13.73□□□□□ -0.21
PBX4-202ENST00000557978 CORO2AQ92828 525 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 FAM3DQ96BQ1 224 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 URM1Q9BTM9 101 aaKnown RBP13.73□□□□□ -0.21
PBX4-202ENST00000557978 MRPS26Q9BYN8 205 aaKnown RBP13.73□□□□□ -0.21
PBX4-202ENST00000557978 GAL3ST2Q9H3Q3 398 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 HEXA-AS1Q9H8Q6 139 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 OR6C3Q9NZP0 311 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 ZNF69Q9UC07 566 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 A0A0A6YYJ9 748 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 ODAMA1E959 279 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 GLAP06280 429 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 FUT3P21217 361 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 CFPP27918 469 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 ERVFRD-1P60508 538 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 RPS27AP62979 156 aaKnown RBP13.73□□□□□ -0.21
PBX4-202ENST00000557978 QRFPP83859 136 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 P2RY14Q15391 338 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 HES5Q5TA89 166 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 OR10K2Q6IF99 312 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 C11orf42Q8N5U0 333 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 ZNF565Q8N9K5 539 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 YIPF6Q96EC8 236 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 COQ2Q96H96 371 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 SUCNR1Q9BXA5 334 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 ING3Q9NXR8 418 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 TAS2R3Q9NYW6 316 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 RCC2Q9P258 522 aaKnown RBP13.73□□□□□ -0.21
PBX4-202ENST00000557978 PEX16Q9Y5Y5 336 aa13.73□□□□□ -0.21
PBX4-202ENST00000557978 IGHV3OR16-10A0A075B7F0 116 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 IGHV1-69DA0A0B4J2H0 117 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 AIPO00170 330 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 TCF21O43680 179 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 AIREO43918 545 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 IGHV1-69P01742 117 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 SMIM18P0DKX4 95 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 UBE2E1P51965 193 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 DLX6P56179 175 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 CLDN12P56749 244 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 OR10A3P58181 314 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 UNC119Q13432 240 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 FAM189A2Q15884 450 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 C2orf76Q3KRA6 126 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 SLC35E4Q6ICL7 350 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 RAB12Q6IQ22 244 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 RBMS3Q6XE24 437 aaKnown RBP13.72□□□□□ -0.21
PBX4-202ENST00000557978 BRD3OSQ6XYD6 125 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 USP43Q70EL4 1123 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 C22orf15Q8WYQ4 148 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 TNFRSF14Q92956 283 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 NEDD4LQ96PU5 975 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 CENPOQ9BU64 300 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 TM2D1Q9BX74 207 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 FBLN5Q9UBX5 448 aa13.72□□□□□ -0.21
PBX4-202ENST00000557978 MEIKINA0A087WXM9 373 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 NOTOA8MTQ0 251 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 RNASEK-C17orf49H0YIS7 233 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 PDCD6O75340 191 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 CA11O75493 328 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 SDC2P34741 201 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 RSBN1Q5VWQ0 802 aaPredicted RBP13.71□□□□□ -0.22
PBX4-202ENST00000557978 TCF23Q7RTU1 214 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 PRIMA1Q86XR5 153 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 PLPPR1Q8TBJ4 325 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 JMJD8Q96S16 334 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 ZNF581Q9P0T4 197 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 KIF25Q9UIL4 384 aa13.71□□□□□ -0.22
PBX4-202ENST00000557978 TMEM30CPA0ZSE6 113 aa13.7□□□□□ -0.22
PBX4-202ENST00000557978 MEX3AA1L020 520 aaKnown RBP13.7□□□□□ -0.22
PBX4-202ENST00000557978 ZNF729A6NN14 1252 aaPredicted RBP13.7□□□□□ -0.22
PBX4-202ENST00000557978 IGHV1-8P0DP01 117 aa13.7□□□□□ -0.22
PBX4-202ENST00000557978 PDZD9Q8IXQ8 264 aa13.7□□□□□ -0.22
PBX4-202ENST00000557978 OR13F1Q8NGS4 319 aa13.7□□□□□ -0.22
PBX4-202ENST00000557978 SLC6A7Q99884 636 aa13.7□□□□□ -0.22
PBX4-202ENST00000557978 KCNK15Q9H427 330 aa13.7□□□□□ -0.22
PBX4-202ENST00000557978 LIN7BQ9HAP6 207 aa13.7□□□□□ -0.22
PBX4-202ENST00000557978 ETAA1Q9NY74 926 aa13.7□□□□□ -0.22
PBX4-202ENST00000557978 RAB22AQ9UL26 194 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms