RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ABCA11PQ4W5N1 156 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 CENPVQ7Z7K6 275 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-235ENST00000557740 SATL1Q86VE3 508 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 RHOXF1Q8NHV9 184 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 TNFAIP8L1Q8WVP5 186 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 TOMM40LQ969M1 308 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 RPEQ96AT9 228 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 FAM192AQ9GZU8 254 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 KIF25Q9UIL4 384 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 RPL36Q9Y3U8 105 aaKnown RBP11.7□□□□□ -0.54
SHMT2-235ENST00000557740 AMMECR1Q9Y4X0 333 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-235ENST00000557740 MEIKINA0A087WXM9 373 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 A0A087X0M5 115 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 A0A1B0GX30 115 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 TCRBV4S1A1TA0A5B7 111 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 OOSP1A8MZH6 123 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 M0QZK8 103 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 PF4P02776 101 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 CD33P20138 364 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 CD83Q01151 205 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 RSU1Q15404 277 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 C17orf58Q2M2W7 97 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 KLHL22Q53GT1 634 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 FBLN7Q53RD9 439 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 KHDC1LQ5JSQ8 128 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 C9orf152Q5JTZ5 239 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 ELP2Q6IA86 826 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 Q6ZPA2 131 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 PXT1Q8NFP0 134 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 OR4X2Q8NGF9 303 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 OR51T1Q8NGJ9 327 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 OR52I1Q8NGK6 324 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 CNIH3Q8TBE1 160 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 MRAPQ8TCY5 172 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 PHF21AQ96BD5 680 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 KIRREL1Q96J84 757 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 RBM14Q96PK6 669 aaKnown RBP11.69□□□□□ -0.54
SHMT2-235ENST00000557740 PCDHB16Q9NRJ7 776 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 NECAP2Q9NVZ3 263 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 CALYQ9NYX4 217 aa11.69□□□□□ -0.54
SHMT2-235ENST00000557740 LOC100130705A0A1B0GUX0 176 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 GABRPO00591 440 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 CD2P06729 351 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 C21orf33P30042 268 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-235ENST00000557740 SOX2P48431 317 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 IL13RA2Q14627 380 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 ZNF565Q8N9K5 539 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 OR51A2Q8NGJ7 313 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 OR13A1Q8NGR1 328 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 OR10K1Q8NGX5 313 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 ZNF649Q9BS31 505 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 JAM3Q9BX67 310 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 BARHL1Q9BZE3 327 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 TAS2R4Q9NYW5 299 aa11.68□□□□□ -0.54
SHMT2-235ENST00000557740 TSSC4Q9Y5U2 329 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-235ENST00000557740 TRAV24A0A0B4J272 114 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 SH2D7A6NKC9 451 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-235ENST00000557740 LY6LH3BQJ8 138 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 IL1AP01583 271 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 FAM106CPP0CH98 169 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 KCNJ3P48549 501 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 GTF2A1P52655 376 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-235ENST00000557740 PPP3R1P63098 170 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 PIGYQ3MUY2 71 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 KIAA2026Q5HYC2 2103 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 PQLC1Q8N2U9 271 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 MRGPRDQ8TDS7 321 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 GPR148Q8TDV2 347 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 RGP1Q92546 391 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-235ENST00000557740 MYDGFQ969H8 173 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 SLC29A1Q99808 456 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 NCOR1P1Q9H4R4 102 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 FAM118AQ9NWS6 357 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 IDI2-AS1Q9NZ38 188 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 MOB4Q9Y3A3 225 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 HSPE1-MOB4S4R3N1 261 aa11.67□□□□□ -0.54
SHMT2-235ENST00000557740 J3QR06 171 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 HTR3BO95264 441 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 CLIC3O95833 236 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 IGHV3-7P01780 117 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 LOXL3P58215 753 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 MADCAM1Q13477 382 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 LTC4SQ16873 150 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 CCDC58Q4VC31 144 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 TCTEX1D4Q5JR98 221 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 UTF1Q5T230 341 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 RSBN1Q5VWQ0 802 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-235ENST00000557740 ZNF529Q6P280 563 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 RPL22L1Q6P5R6 122 aaKnown RBP11.66□□□□□ -0.54
SHMT2-235ENST00000557740 TMPRSS11AQ6ZMR5 421 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 ZNF555Q8NEP9 628 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 OR56B4Q8NH76 319 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 PLPPR1Q8TBJ4 325 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 APH1BQ8WW43 257 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 TMEM106AQ96A25 262 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 S100A14Q9HCY8 104 aa11.66□□□□□ -0.54
SHMT2-235ENST00000557740 MRPS18AQ9NVS2 196 aaKnown RBP11.66□□□□□ -0.54
SHMT2-235ENST00000557740 AMY1AP04745 511 aa11.65□□□□□ -0.54
SHMT2-235ENST00000557740 AMY2AP04746 511 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms