RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 TRAV24A0A0B4J272 114 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 ODAMA1E959 279 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 BTBD17A6NE02 478 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 MRPS14O60783 128 aaKnown RBP12.93□□□□□ -0.34
TUBB3-214ENST00000557490 OR7C1O76099 320 aaPredicted RBP12.93□□□□□ -0.34
TUBB3-214ENST00000557490 IGHV1-8P0DP01 117 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 CPEP16870 476 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 PSMA1P25786 263 aaKnown RBP12.93□□□□□ -0.34
TUBB3-214ENST00000557490 GLIPR1P48060 266 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 KCNJ3P48549 501 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 ATXN7L3Q14CW9 347 aaPredicted RBP12.93□□□□□ -0.34
TUBB3-214ENST00000557490 FAM27D1Q5T7N8 215 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 BARHL1Q9BZE3 327 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 SLITRK2Q9H156 845 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 GAL3ST2Q9H3Q3 398 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 SESN1Q9Y6P5 492 aa12.93□□□□□ -0.34
TUBB3-214ENST00000557490 CLPXO76031 633 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 IGHV4-59P01825 116 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 CRYBA1P05813 215 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 HKR1P10072 659 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 SRMP19623 302 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 IER3P46695 156 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 RPS25P62851 125 aaKnown RBP12.92□□□□□ -0.34
TUBB3-214ENST00000557490 DEFA6Q01524 100 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 MPV17LQ2QL34 196 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 GLT8D1Q68CQ7 371 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 SVOPQ8N4V2 548 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 CORO2AQ92828 525 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 FOXRED1Q96CU9 486 aaPredicted RBP12.92□□□□□ -0.34
TUBB3-214ENST00000557490 MRPS24Q96EL2 167 aaKnown RBP12.92□□□□□ -0.34
TUBB3-214ENST00000557490 COQ2Q96H96 371 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 DPCDQ9BVM2 203 aaPredicted RBP12.92□□□□□ -0.34
TUBB3-214ENST00000557490 YTHDF1Q9BYJ9 559 aaKnown RBP12.92□□□□□ -0.34
TUBB3-214ENST00000557490 CHIAQ9BZP6 476 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 IFT22Q9H7X7 185 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 ACOT13Q9NPJ3 140 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 TAS2R3Q9NYW6 316 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 OR6C3Q9NZP0 311 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 ZNRD1Q9P1U0 126 aa12.92□□□□□ -0.34
TUBB3-214ENST00000557490 A0A1W2PP11 408 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 GEMIN2O14893 280 aaKnown RBP12.91□□□□□ -0.34
TUBB3-214ENST00000557490 SC5DO75845 299 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 ARG1P05089 322 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 UCHL1P09936 223 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 COMPP49747 757 aaPredicted RBP12.91□□□□□ -0.34
TUBB3-214ENST00000557490 FOXL1Q12952 345 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 DYNC1I2Q13409 638 aaKnown RBP12.91□□□□□ -0.34
TUBB3-214ENST00000557490 ATAD3CQ5T2N8 411 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 HIST2H2BDQ6DRA6 164 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 LRRTM1Q86UE6 522 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 SUMF2Q8NBJ7 301 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 BEND2Q8NDZ0 799 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 OR4D6Q8NGJ1 314 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 PPIL3Q9H2H8 161 aaKnown RBP12.91□□□□□ -0.34
TUBB3-214ENST00000557490 NCOR1P1Q9H4R4 102 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 GHRLQ9UBU3 117 aa12.91□□□□□ -0.34
TUBB3-214ENST00000557490 MEIKINA0A087WXM9 373 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 FAM181BA6NEQ2 426 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 CRTAPO75718 401 aaPredicted RBP12.9□□□□□ -0.34
TUBB3-214ENST00000557490 ARL6IP5O75915 188 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 GABRA5P31644 462 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 GP2P55259 537 aaKnown RBP12.9□□□□□ -0.34
TUBB3-214ENST00000557490 TAF9Q16594 264 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 PRAMEF5Q5TYX0 476 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 OR52W1Q6IF63 320 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 TMEM91Q6ZNR0 172 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 LYPD6Q86Y78 171 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 ZNF565Q8N9K5 539 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 OR11H6Q8NGC7 330 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 OR5R1Q8NH85 324 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 C17orf50Q8WW18 174 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 DYRK2Q92630 601 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 TMEM133Q9H2Q1 129 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 SPACA1Q9HBV2 294 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 KIF25Q9UIL4 384 aa12.9□□□□□ -0.34
TUBB3-214ENST00000557490 TBL2Q9Y4P3 447 aaKnown RBP12.9□□□□□ -0.34
TUBB3-214ENST00000557490 ZNF729A6NN14 1252 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-214ENST00000557490 UBBP0CG47 229 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 MGMTP16455 207 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 CDK2P24941 298 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 GLP1RP43220 463 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 EMX1Q04741 257 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-214ENST00000557490 AWAT1Q58HT5 328 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 ZNF626Q68DY1 528 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 HEPN1Q6WQI6 88 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 GDPGP1Q6ZNW5 385 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 C3orf56Q8N813 242 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 NEK7Q8TDX7 302 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 CLEC7AQ9BXN2 247 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 SELENOIQ9C0D9 397 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 CST11Q9H112 138 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 MEGF9Q9H1U4 602 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 BANF2Q9H503 90 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 ZNF581Q9P0T4 197 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 LRRC42Q9Y546 428 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 VWFP04275 2813 aa12.89□□□□□ -0.35
TUBB3-214ENST00000557490 IGHV2-26A0A0B4J1V2 119 aa12.88□□□□□ -0.35
TUBB3-214ENST00000557490 TMEM30CPA0ZSE6 113 aa12.88□□□□□ -0.35
TUBB3-214ENST00000557490 ODF3BA8MYP8 253 aa12.88□□□□□ -0.35
TUBB3-214ENST00000557490 H3BUI4 141 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms