RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 GYPBP06028 91 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 CALCBP10092 127 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 NCK1P16333 377 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 EDN2P20800 178 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 GLRA1P23415 457 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 ENTPD1P49961 510 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 GPM6AP51674 278 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 SLC25A1P53007 311 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF121P58317 390 aaPredicted RBP4.67□□□□□ -1.66
VPS33B-207ENST00000557470 GRB2P62993 217 aaKnown RBP4.67□□□□□ -1.66
VPS33B-207ENST00000557470 PPP1R8Q12972 351 aaKnown RBP4.67□□□□□ -1.66
VPS33B-207ENST00000557470 PRDX4Q13162 271 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 SSX2Q16385 188 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 C6orf183Q5T699 404 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 C10orf99Q6UWK7 81 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 TRPM8Q7Z2W7 1104 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 FTMTQ8N4E7 242 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 LINC00471Q8N535 108 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 FAM86B1Q8N7N1 296 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 LINC00482Q8N8I6 264 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 OR4M1Q8NGD0 313 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 OR52H1Q8NGJ2 320 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 OR2T4Q8NH00 348 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 RCN3Q96D15 328 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 RNF170Q96K19 258 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 C7orf34Q96L11 122 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 CHID1Q9BWS9 393 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 CADM1Q9BY67 442 aaKnown RBP4.67□□□□□ -1.66
VPS33B-207ENST00000557470 OR10A2Q9H208 303 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 EGLN3Q9H6Z9 239 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 SAR1AQ9NR31 198 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 USE1Q9NZ43 259 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 LRP12Q9Y561 859 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 TSSC4Q9Y5U2 329 aaPredicted RBP4.67□□□□□ -1.66
VPS33B-207ENST00000557470 MPC1Q9Y5U8 109 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 MEX3AA1L020 520 aaKnown RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 RFPL4AA6NLU0 287 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 ZAR1LA6NP61 321 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 E9PI62 339 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 RFPL4AL1F8VTS6 287 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 CLIC3O95833 236 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 CST4P01036 141 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 NHLRC4P0CG21 123 aaPredicted RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 PIPP12273 146 aaPredicted RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 HSD11B1P28845 292 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 FMO3P31513 532 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 VHLP40337 213 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 OPRL1P41146 370 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 CEBPDP49716 269 aaPredicted RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 EIF2B2P49770 351 aaKnown RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 DYNLT3P51808 116 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 DLX6P56179 175 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 GNG2P59768 71 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 POLR2GP62487 172 aaKnown RBP eCLIP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 SRSF3P84103 164 aaKnown RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 EIF2B1Q14232 305 aaKnown RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 DMRTC1Q5HYR2 192 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 TEX30Q5JUR7 227 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 CLVS2Q5SYC1 327 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF626Q68DY1 528 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 TEX38Q6PEX7 206 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 ACP7Q6ZNF0 438 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 ARPINQ7Z6K5 226 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 RTN4RL2Q86UN3 420 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 ZDHHC23Q8IYP9 409 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 CD177Q8N6Q3 437 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 MINDY2Q8NBR6 621 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 SLC37A3Q8NCC5 494 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 OR56B1Q8NGI3 324 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 OR6K6Q8NGW6 343 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 RNF133Q8WVZ7 376 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 PIGCQ92535 297 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 DPF1Q92782 380 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 MALSU1Q96EH3 234 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 LYZL4Q96KX0 146 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 C20orf173Q96LM9 149 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 FYTTD1Q96QD9 318 aaKnown RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 AMELYQ99218 206 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 C6orf62Q9GZU0 229 aaPredicted RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 OR51I2Q9H344 312 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 RGCCQ9H4X1 137 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 ABCB9Q9NP78 766 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 GAR1Q9NY12 217 aaKnown RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 CD300AQ9UGN4 299 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 AP3M1Q9Y2T2 418 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 CBY1Q9Y3M2 126 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 TBL2Q9Y4P3 447 aaKnown RBP4.66□□□□□ -1.66
VPS33B-207ENST00000557470 HILPDAQ9Y5L2 63 aa4.66□□□□□ -1.66
VPS33B-207ENST00000557470 C17orf98A8MV24 154 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF732B4DXR9 585 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 F5H697 171 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 SLC1A7O00341 560 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 CTDSPLO15194 276 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 SNX3O60493 162 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 GADD45GO95257 159 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 APOC1P02654 83 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 SEMG1P04279 462 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF735P0CB33 412 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 STAG3L3P0CL85 134 aa4.65□□□□□ -1.67
VPS33B-207ENST00000557470 CLUP10909 449 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms