RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 HSPB6O14558 160 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 OR7C1O76099 320 aaPredicted RBP10.19□□□□□ -0.78
SLIRP-209ENST00000557342 UBBP0CG47 229 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 IGHV1-8P0DP01 117 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 RANBP1P43487 201 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 GLIPR1P48060 266 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 LGALS4P56470 323 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 RPS25P62851 125 aaKnown RBP10.19□□□□□ -0.78
SLIRP-209ENST00000557342 PAX5Q02548 391 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 EMX1Q04741 257 aaPredicted RBP10.19□□□□□ -0.78
SLIRP-209ENST00000557342 ATXN7L3Q14CW9 347 aaPredicted RBP10.19□□□□□ -0.78
SLIRP-209ENST00000557342 FAM27D1Q5T7N8 215 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 OR52W1Q6IF63 320 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 C16orf87Q6PH81 154 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 ZNF782Q6ZMW2 699 aaPredicted RBP10.19□□□□□ -0.78
SLIRP-209ENST00000557342 TCF23Q7RTU1 214 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 LRRTM1Q86UE6 522 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 LYPD6Q86Y78 171 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 PNKDQ8N490 385 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 OR4D6Q8NGJ1 314 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 FCGR1BQ92637 280 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 GCDHQ92947 438 aaPredicted RBP10.19□□□□□ -0.78
SLIRP-209ENST00000557342 COQ2Q96H96 371 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 SPACA1Q9HBV2 294 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 SESN1Q9Y6P5 492 aa10.19□□□□□ -0.78
SLIRP-209ENST00000557342 FBN1P35555 2871 aaKnown RBP10.18□□□□□ -0.78
SLIRP-209ENST00000557342 MEX3AA1L020 520 aaKnown RBP10.18□□□□□ -0.78
SLIRP-209ENST00000557342 TMEM89A2RUT3 159 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 GEMIN2O14893 280 aaKnown RBP10.18□□□□□ -0.78
SLIRP-209ENST00000557342 CLPXO76031 633 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 COX7A1P24310 79 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 IER3P46695 156 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 GP2P55259 537 aaKnown RBP10.18□□□□□ -0.78
SLIRP-209ENST00000557342 TMEM91Q6ZNR0 172 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 SPARTQ8N0X7 666 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 ZNF565Q8N9K5 539 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 SUMF2Q8NBJ7 301 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 DPCDQ9BVM2 203 aaPredicted RBP10.18□□□□□ -0.78
SLIRP-209ENST00000557342 CST11Q9H112 138 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 ZNRD1Q9P1U0 126 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 TBL2Q9Y4P3 447 aaKnown RBP10.18□□□□□ -0.78
SLIRP-209ENST00000557342 ATRQ13535 2644 aa10.18□□□□□ -0.78
SLIRP-209ENST00000557342 MEIKINA0A087WXM9 373 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 A0A1W2PP11 408 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A10PA6NDY2 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A18PA6NE21 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A16PA6NEW6 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A20PA6NIJ5 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A8PA6NJQ4 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A7PA6NKC0 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 ZNF729A6NN14 1252 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A22PA8MWA6 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A12PA8MX19 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A5PA8MXJ8 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A23PA8MXZ1 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 CRTAPO75718 401 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-209ENST00000557342 ARG1P05089 322 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 CRYBA1P05813 215 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A15PP0C7V4 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A13PP0C7W8 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A14PP0C7W9 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FAM90A24PP0C7X0 464 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 HKR1P10072 659 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 CD37P11049 281 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 MGMTP16455 207 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 RPL15P61313 204 aaKnown RBP10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FABP5Q01469 135 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 FOXL1Q12952 345 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 RBM39Q14498 530 aaKnown RBP10.17□□□□□ -0.78
SLIRP-209ENST00000557342 TAF9Q16594 264 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 C1orf100Q5SVJ3 147 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 ATAD3CQ5T2N8 411 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 UBE2UQ5VVX9 321 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 HEPN1Q6WQI6 88 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 C12orf54Q6X4T0 127 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 RTN4RL2Q86UN3 420 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 BEND2Q8NDZ0 799 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 OR11H6Q8NGC7 330 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 OR5R1Q8NH85 324 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 SELENOIQ9C0D9 397 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 MEGF9Q9H1U4 602 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 PPIL3Q9H2H8 161 aaKnown RBP10.17□□□□□ -0.78
SLIRP-209ENST00000557342 TMEM133Q9H2Q1 129 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 NDUFB11Q9NX14 153 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 ING3Q9NXR8 418 aa10.17□□□□□ -0.78
SLIRP-209ENST00000557342 MCRIP1C9JLW8 97 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 CCRL2O00421 344 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 GALP22466 123 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 CALRP27797 417 aaKnown RBP10.16□□□□□ -0.78
SLIRP-209ENST00000557342 HTR2CP28335 458 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 COMPP49747 757 aaPredicted RBP10.16□□□□□ -0.78
SLIRP-209ENST00000557342 PSMD7P51665 324 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 DYNC1I2Q13409 638 aaKnown RBP10.16□□□□□ -0.78
SLIRP-209ENST00000557342 SSX1Q16384 188 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 AANATQ16613 207 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 RSBN1Q5VWQ0 802 aaPredicted RBP10.16□□□□□ -0.78
SLIRP-209ENST00000557342 ZNF626Q68DY1 528 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 SLC35E4Q6ICL7 350 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 ZNF773Q6PK81 442 aa10.16□□□□□ -0.78
SLIRP-209ENST00000557342 OR6M1Q8NGM8 313 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms