RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 GPR37O15354 613 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 CD5LO43866 347 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 TMEM127O75204 238 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 ECDO95905 644 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-227ENST00000557269 CSN2P05814 226 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 RANBP1P43487 201 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 DVL1P1P54792 670 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-227ENST00000557269 P2RX3P56373 397 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 SCAND1P57086 179 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 RPL31P62899 125 aaKnown RBP10.57□□□□□ -0.72
SHMT2-227ENST00000557269 ZNF273Q14593 569 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 RSBN1Q5VWQ0 802 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-227ENST00000557269 CD276Q5ZPR3 534 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 CMTM4Q8IZR5 234 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 FAM185AQ8N0U4 392 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 SAMD12Q8N8I0 201 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 OR10R2Q8NGX6 335 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 C8orf46Q8TAG6 207 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 KCTD12Q96CX2 325 aaKnown RBP10.57□□□□□ -0.72
SHMT2-227ENST00000557269 POM121Q96HA1 1249 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 ARHGAP5-AS1Q96IT6 56 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 DCUN1D5Q9BTE7 237 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 MRI1Q9BV20 369 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 PECRQ9BY49 303 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 SLIRPQ9GZT3 109 aaKnown RBP10.57□□□□□ -0.72
SHMT2-227ENST00000557269 CCDC59Q9P031 241 aaKnown RBP10.57□□□□□ -0.72
SHMT2-227ENST00000557269 NDUFA13Q9P0J0 144 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 INSIG2Q9Y5U4 225 aa10.57□□□□□ -0.72
SHMT2-227ENST00000557269 PPIAL4CA0A0B4J2A2 164 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 MCRIP1C9JLW8 97 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 HPGDSO60760 199 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 AVPP01185 164 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 EIF4EP06730 217 aaKnown RBP10.56□□□□□ -0.72
SHMT2-227ENST00000557269 PPIAL4GP0DN37 164 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 CCL3L1P16619 93 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 ERP29P30040 261 aaKnown RBP10.56□□□□□ -0.72
SHMT2-227ENST00000557269 ERVFRD-1P60508 538 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 KRBOX4Q5JUW0 171 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 FAHD2BQ6P2I3 314 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-227ENST00000557269 Q6ZPA2 131 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 Q71RC1 249 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-227ENST00000557269 GLCCI1Q86VQ1 547 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 OR56B1Q8NGI3 324 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 PPP1R35Q8TAP8 253 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 NEK7Q8TDX7 302 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 FAHD2AQ96GK7 314 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 NEDD4LQ96PU5 975 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 ZMAT3Q9HA38 289 aaKnown RBP10.56□□□□□ -0.72
SHMT2-227ENST00000557269 SPACA1Q9HBV2 294 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 PLEKHJ1Q9NW61 149 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 ETAA1Q9NY74 926 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 KIF25Q9UIL4 384 aa10.56□□□□□ -0.72
SHMT2-227ENST00000557269 ELF5Q9UKW6 265 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-227ENST00000557269 TRBV23-1A0A0A0MS06 115 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 ODAMA1E959 279 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 METTL21EPA6NDL7 271 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 CTDSP2O14595 271 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 ENSAO43768 121 aaKnown RBP10.55□□□□□ -0.72
SHMT2-227ENST00000557269 MT-ND4P03905 459 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 GLAP06280 429 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 GNB3P16520 340 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 ELK1P19419 428 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 SOX6P35712 828 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 DLX1P56177 255 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 DLX6P56179 175 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 ARF6P62330 175 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 PAX5Q02548 391 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 PRB3Q04118 309 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-227ENST00000557269 PAX8Q06710 450 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 DYNC1I2Q13409 638 aaKnown RBP10.55□□□□□ -0.72
SHMT2-227ENST00000557269 C11orf91Q3C1V1 193 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 UBE2NLQ5JXB2 153 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 DCAF12L2Q5VW00 463 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 SLC35E4Q6ICL7 350 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 CLEC9AQ6UXN8 241 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 ZNF497Q6ZNH5 498 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 C1orf229Q6ZS94 237 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-227ENST00000557269 Q6ZTK2 550 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 C5orf24Q7Z6I8 188 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 IZUMO1Q8IYV9 350 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 C11orf42Q8N5U0 333 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 CCDC107Q8WV48 283 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 ACOT12Q8WYK0 555 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 RAB3CQ96E17 227 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 HDHD3Q9BSH5 251 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-227ENST00000557269 TMPRSS13Q9BYE2 586 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 ABCG5Q9H222 651 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 MIXL1Q9H2W2 232 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 YAE1D1Q9NRH1 226 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 OPN4Q9UHM6 478 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 AK3Q9UIJ7 227 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 HSF4Q9ULV5 492 aa10.55□□□□□ -0.72
SHMT2-227ENST00000557269 DOCK11Q5JSL3 2073 aa10.54□□□□□ -0.72
SHMT2-227ENST00000557269 ABCA1O95477 2261 aa10.54□□□□□ -0.72
SHMT2-227ENST00000557269 A0A075B6Q4 140 aa10.54□□□□□ -0.72
SHMT2-227ENST00000557269 MEIKINA0A087WXM9 373 aa10.54□□□□□ -0.72
SHMT2-227ENST00000557269 A0A1W2PQ09 198 aa10.54□□□□□ -0.72
SHMT2-227ENST00000557269 MFNGO00587 321 aa10.54□□□□□ -0.72
SHMT2-227ENST00000557269 LIPFP07098 398 aa10.54□□□□□ -0.72
SHMT2-227ENST00000557269 CGB3P0DN86 165 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms