RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 THNSL2Q86YJ6 484 aa14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 C5orf56Q8N8D9 126 aa14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 OR13C3Q8NGS6 347 aa14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 CHPT1Q8WUD6 406 aa14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 LEAP2Q969E1 77 aa14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 MCRIP2Q9BUT9 160 aaKnown RBP14.47□□□□□ -0.09
VIPAS39-209ENST00000556909 HSPB6O14558 160 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 DEGS1O15121 323 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 SLC16A6O15403 523 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 CGB3P0DN86 165 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 CGB7P0DN87 165 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 ZP1P60852 638 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 DRAM1Q8N682 238 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 OR51T1Q8NGJ9 327 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 CALYQ9NYX4 217 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 MYRFQ9Y2G1 1151 aa14.46□□□□□ -0.09
VIPAS39-209ENST00000556909 SERPINE3A8MV23 424 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 NUDT19A8MXV4 375 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 J3QR06 171 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 J3QRE1 110 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 IGHV3-7P01780 117 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 HTR1AP08908 422 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 TMEM11P17152 192 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 SLC6A1P30531 599 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 CCR9P51686 369 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 BNIP1Q12981 228 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 DCTN2Q13561 401 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 DIAPH2-AS1Q14236 149 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 HES1Q14469 280 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 KCTD20Q7Z5Y7 419 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 KLHL30-AS1Q8NEE0 82 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 OR13A1Q8NGR1 328 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 HRASLS5Q96KN8 279 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 P2RX4Q99571 388 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 ZCCHC4Q9H5U6 513 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 KIF25Q9UIL4 384 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 LINC00527Q9UJ94 153 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 AP4S1Q9Y587 144 aa14.45□□□□□ -0.1
VIPAS39-209ENST00000556909 DAPL1A0PJW8 107 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 OR4C45A6NMZ5 311 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 H0YJX3 145 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 FGF16O43320 207 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 IL1AP01583 271 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 TMEM225BP0DP42 221 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 MYCNOSP40205 109 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 MADCAM1Q13477 382 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 ZNF565Q8N9K5 539 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 RNFT2Q96EX2 444 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 PELI1Q96FA3 418 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 LINC00574Q9H8X3 128 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 ZFP57Q9NU63 452 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 IDI2-AS1Q9NZ38 188 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 OAZ3Q9UMX2 235 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 PSG11Q9UQ72 335 aa14.44□□□□□ -0.1
VIPAS39-209ENST00000556909 MEIKINA0A087WXM9 373 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 H0YHG0 523 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 HCKP08631 526 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 FCGR1AP12314 374 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 MTNR1BP49286 362 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 GNG10P50151 68 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 RAB7AP51149 207 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 KISS1Q15726 138 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 LTC4SQ16873 150 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 PAN3Q58A45 887 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 OR8H3Q8N146 312 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 OSBPL10Q9BXB5 764 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 NCOR1P1Q9H4R4 102 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 IMPAD1Q9NX62 359 aa14.43□□□□□ -0.1
VIPAS39-209ENST00000556909 TRAV24A0A0B4J272 114 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 NPIPB11E5RHQ5 1161 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 J3QLW9 94 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 SULT1B1O43704 296 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 IGKV1D-33P01593 117 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 IGKV1-33P01594 117 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 IGHG2P01859 326 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 DBTP11182 482 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 ZNF19P17023 458 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 SLC35B1P78383 322 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 DGCR2P98153 550 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 ALKBH1Q13686 389 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 HNF4GQ14541 408 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 ZNF691Q5VV52 312 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 RSBN1Q5VWQ0 802 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 ELP2Q6IA86 826 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 SLC35E3Q7Z769 313 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 COMMD1Q8N668 190 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 TRUB1Q8WWH5 349 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 C4orf36Q96KX1 117 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 DUX3Q96PT4 197 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 NR1H4Q96RI1 486 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 STAB2Q8WWQ8 2551 aa14.42□□□□□ -0.1
VIPAS39-209ENST00000556909 C21orf33P30042 268 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 SSTR5P35346 364 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 PAX5Q02548 391 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 ZSCAN26Q16670 478 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 LPCAT4Q643R3 524 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 UNQ9370/PRO34162Q6UXP9 181 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 ZNF695Q8IW36 515 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 FOXRED2Q8IWF2 684 aa14.41□□□□□ -0.1
VIPAS39-209ENST00000556909 STPG2Q8N412 459 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms