RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 METRNQ9UJH8 293 aa9.35□□□□□ -0.91
FOXN3-212ENST00000556541 MGAT4AQ9UM21 535 aa9.35□□□□□ -0.91
FOXN3-212ENST00000556541 KCNK7Q9Y2U2 307 aa9.35□□□□□ -0.91
FOXN3-212ENST00000556541 CCDC168Q8NDH2 2452 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 CSMD2Q7Z408 3487 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 KIAA1324LA8MWY0 1029 aaPredicted RBP9.34□□□□□ -0.91
FOXN3-212ENST00000556541 SIRPB1O00241 398 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 RGS5O15539 181 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 FCN3O75636 299 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 DIRAS3O95661 229 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 NAPSAO96009 420 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 RBP4P02753 201 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 LIPFP07098 398 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 DTYMKP23919 212 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 TNFSF8P32971 234 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 CEBPDP49716 269 aaPredicted RBP9.34□□□□□ -0.91
FOXN3-212ENST00000556541 P2RX3P56373 397 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 GRK1Q15835 563 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 MOGAT2Q3SYC2 334 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 TMEM69Q5SWH9 247 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 ATAD3CQ5T2N8 411 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 HACD4Q5VWC8 232 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 RSBN1Q5VWQ0 802 aaPredicted RBP9.34□□□□□ -0.91
FOXN3-212ENST00000556541 PYHIN1Q6K0P9 492 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 ZNF880Q6PDB4 577 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 TRAT1Q6PIZ9 186 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 GDPD3Q7L5L3 318 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 BATF2Q8N1L9 274 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 ASCC1Q8N9N2 400 aaKnown RBP9.34□□□□□ -0.91
FOXN3-212ENST00000556541 ZNRF1Q8ND25 227 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 LY6G5BQ8NDX9 201 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 TMEM185AQ8NFB2 350 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 OR4S1Q8NGB4 309 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 COQ2Q96H96 371 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 ARHGAP5-AS1Q96IT6 56 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 Q96MF0 132 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 SULT4A1Q9BR01 284 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 DCTN5Q9BTE1 182 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 CHST6Q9GZX3 395 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 AUNIPQ9H7T9 357 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 LINC00574Q9H8X3 128 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 SCPEP1Q9HB40 452 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 MBNL3Q9NUK0 354 aaKnown RBP9.34□□□□□ -0.91
FOXN3-212ENST00000556541 OR6C3Q9NZP0 311 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 ABCA2Q9BZC7 2435 aa9.34□□□□□ -0.91
FOXN3-212ENST00000556541 TMEM30CPA0ZSE6 113 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 FAM25AB3EWG3 89 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 FAM25CB3EWG5 89 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 FAM25GB3EWG6 89 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 HLA-DQB1P01920 261 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 GATA3P23771 443 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 RBMXP38159 391 aaKnown RBP9.33□□□□□ -0.92
FOXN3-212ENST00000556541 CBX5P45973 191 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 SNU13P55769 128 aaKnown RBP9.33□□□□□ -0.92
FOXN3-212ENST00000556541 RIPPLY3P57055 190 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 TAS2R20P59543 309 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 GNB2P62879 340 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 ZNF45Q02386 682 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 PAX2Q02962 417 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 SSBP1Q04837 148 aaKnown RBP9.33□□□□□ -0.92
FOXN3-212ENST00000556541 TMEM30BQ3MIR4 351 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 CDNFQ49AH0 187 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 CNIH2Q6PI25 160 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 C6orf201Q7Z4U5 140 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 KIR3DL3Q8N743 410 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 OR4M1Q8NGD0 313 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 DIRAS2Q96HU8 199 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 PPA2Q9H2U2 334 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 RAB9BQ9NP90 201 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 C12orf4Q9NQ89 552 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 ETAA1Q9NY74 926 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 TAS2R3Q9NYW6 316 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 EXTL2Q9UBQ6 330 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 RPUSD1Q9UJJ7 312 aaKnown RBP9.33□□□□□ -0.92
FOXN3-212ENST00000556541 ANAPC10Q9UM13 185 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 UBE2J1Q9Y385 318 aaPredicted RBP9.33□□□□□ -0.92
FOXN3-212ENST00000556541 LINC00312Q9Y6C7 94 aa9.33□□□□□ -0.92
FOXN3-212ENST00000556541 TRAV18A0A075B6X5 111 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 A0A1B0GW55 424 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 A0A1W2PPH5 198 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 hADV38S2A0JD32 116 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 ODAMA1E959 279 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 B4DSR2 109 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 ORC5O43913 435 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 MT-ND4P03905 459 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 CD3GP09693 182 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 DUX4L2P0CJ85 424 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 DUX4L3P0CJ86 424 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 DUX4L4P0CJ87 422 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 DUX4L5P0CJ88 424 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 DUX4L6P0CJ89 424 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 DUX4L7P0CJ90 424 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 CGB3P0DN86 165 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 CGB7P0DN87 165 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 GZMHP20718 246 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 GZMKP49863 264 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 SCN1BQ07699 218 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 KRBOX4Q5JUW0 171 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 SPANXN2Q5MJ10 180 aa9.32□□□□□ -0.92
FOXN3-212ENST00000556541 DUX4L9Q6RFH8 374 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms