RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 ETAA1Q9NY74 926 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 RCC2Q9P258 522 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 ONECUT1Q9UBC0 465 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 ITPR3Q14573 2671 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 MEIKINA0A087WXM9 373 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 A0A0G2JMP0 313 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 A0A0X1KG70 313 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 ZNF701M0R085 212 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 FOXB2Q5VYV0 432 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 MZT2AQ6P582 158 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 CLEC9AQ6UXN8 241 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 Q6ZTK2 550 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM89BQ8N5H3 189 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 OR4M2Q8NGB6 313 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 OR10R2Q8NGX6 335 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 ACOT12Q8WYK0 555 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 RAB3CQ96E17 227 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 COQ2Q96H96 371 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 ARHGAP5-AS1Q96IT6 56 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 SULT4A1Q9BR01 284 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 ZMAT3Q9HA38 289 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 CCDC59Q9P031 241 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 KCNS2Q9ULS6 477 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 TRBV23-1A0A0A0MS06 115 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 FUOMA2VDF0 154 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 RGS5O15539 181 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 CD5LO43866 347 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 LY6G6DO95868 133 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 CSN2P05814 226 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 DVL1P1P54792 670 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 KRTAP1-1Q07627 177 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 UBE2NLQ5JXB2 153 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 Q71RC1 249 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 DTX3Q8N9I9 347 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 POM121Q96HA1 1249 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 GSX1Q9H4S2 264 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 KIF25Q9UIL4 384 aa11.6□□□□□ -0.55
VIPAS39-208ENST00000556412 TRAV39A0A0B4J263 110 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 hADV38S2A0JD32 116 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 HPGDSO60760 199 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 LIPFP07098 398 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 GNB3P16520 340 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 GLP1RP43220 463 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 KCNJ3P48549 501 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 TMEM50BP56557 158 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 ARF6P62330 175 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 ZNF273Q14593 569 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 PLAC9Q5JTB6 97 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 TMEM200BQ69YZ2 307 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 CMTM4Q8IZR5 234 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 CCDC107Q8WV48 283 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 PECRQ9BY49 303 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 C6orf62Q9GZU0 229 aaPredicted RBP11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 CHMP1AQ9HD42 196 aaPredicted RBP11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 POLR3KQ9Y2Y1 108 aaPredicted RBP11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 INSIG2Q9Y5U4 225 aa11.59□□□□□ -0.55
VIPAS39-208ENST00000556412 TRGV10A0A0A0MS01 117 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 KIR2DS1A0A191URI9 304 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 TMEM30CPA0ZSE6 113 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 ODAMA1E959 279 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 FAM25AB3EWG3 89 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 FAM25CB3EWG5 89 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 FAM25GB3EWG6 89 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 RAB27BO00194 218 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 CCL3L1P16619 93 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 PAX2Q02962 417 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 RSBN1Q5VWQ0 802 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 IZUMO1Q8IYV9 350 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 OR4K15Q8NH41 348 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 S100A16Q96FQ6 103 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 C7orf69Q9H7B7 122 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 A0A1W2PPH5 198 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 FOXI3A8MTJ6 420 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 SCGNO76038 276 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 GLAP06280 429 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 EIF4EP06730 217 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 HIST1H1DP16402 221 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 ERP29P30040 261 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 MRPS15P82914 257 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 MEF2CQ06413 473 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 MADCAM1Q13477 382 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 C11orf91Q3C1V1 193 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 METTL11BQ5VVY1 283 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 OLFML2AQ68BL7 652 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 LY6G5BQ8NDX9 201 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 MCFD2Q8NI22 146 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 C8orf46Q8TAG6 207 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 SETD6Q8TBK2 473 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 MRGPRDQ8TDS7 321 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 PCGF1Q9BSM1 259 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 DIABLOQ9NR28 239 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 LPAR3Q9UBY5 353 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 AK3Q9UIJ7 227 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 TRAPPC2LQ9UL33 140 aa11.58□□□□□ -0.56
VIPAS39-208ENST00000556412 CREBBPQ92793 2442 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 TRAV18A0A075B6X5 111 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 A8MV72 311 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 GATA3P23771 443 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 CDK2P24941 298 aa11.57□□□□□ -0.56
VIPAS39-208ENST00000556412 DYNC1I2Q13409 638 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms