RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PPIAL4EA0A075B759 164 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 PPIAL4DF5H284 164 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 HPRT1P00492 218 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 PPIAL4FP0DN26 164 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 KIR3DL2P43630 455 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 DHRS7BQ6IAN0 325 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-216ENST00000556083 ZNF788Q6ZQV5 615 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 ZBTB44Q8NCP5 570 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 C20orf24Q9BUV8 137 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 PPIAL4AQ9Y536 164 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 TMEM218A2RU14 115 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 SYNGR1O43759 233 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 LYZL6O75951 148 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 FAM87AP0C7U9 286 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 TMPRSS3P57727 454 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 RAB32Q13637 225 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 Q1RN00 199 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 BSXQ3C1V8 233 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 ZNF528Q3MIS6 628 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 MESTQ5EB52 335 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 C6orf201Q7Z4U5 140 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 HOGA1Q86XE5 327 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 OR4D10Q8NGI6 311 aa9.43□□□□□ -0.9
ACTN1-216ENST00000556083 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 A0A1B0GTL3 188 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 RAB29O14966 203 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
ACTN1-216ENST00000556083 CD160O95971 181 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 CXorf1O96002 111 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 OR5AC1P0C628 307 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 OR3A4PP47883 348 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 ZXDAP98168 799 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 VAX1Q5SQQ9 334 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 COPS9Q8WXC6 57 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 C19orf24Q9BVV8 132 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 WDR13Q9H1Z4 485 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 FAM60AQ9NP50 221 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 CTXND1A0A1B0GTU2 59 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 AKR7A2O43488 359 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 LSM11P83369 360 aaKnown RBP eCLIP9.42□□□□□ -0.9
ACTN1-216ENST00000556083 TNXAQ16473 311 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 PTPMT1Q8WUK0 201 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-216ENST00000556083 TMPRSS13Q9BYE2 586 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 GSX1Q9H4S2 264 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-216ENST00000556083 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 H0Y8G0 127 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 ISLRO14498 428 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 MT-ND6P03923 174 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 FAM181AQ8N9Y4 354 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 OR10G8Q8NGN5 311 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 MRGPRDQ8TDS7 321 aa9.42□□□□□ -0.9
ACTN1-216ENST00000556083 PLEKHB1Q9UF11 243 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-216ENST00000556083 CNTRLQ7Z7A1 2325 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 GAPDHP04406 335 aaKnown RBP9.41□□□□□ -0.9
ACTN1-216ENST00000556083 PMELP40967 661 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 GPR6P46095 362 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-216ENST00000556083 GUCA2AQ02747 115 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 COL9A2Q14055 689 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-216ENST00000556083 THSD4Q6ZMP0 1018 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 FAM214BQ7L5A3 538 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 TMEM190Q8WZ59 177 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 MOGAT1Q96PD6 335 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 KIAA1551Q9HCM1 1747 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 LAMB2P55268 1798 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 MFSD2BA6NFX1 497 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 CT62P0C5K7 136 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 ZNF658BQ4V348 819 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-216ENST00000556083 C8orf82Q6P1X6 216 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-216ENST00000556083 TEPPQ6URK8 271 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 CBLN3Q6UW01 205 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 SLC35E3Q7Z769 313 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 OR2T10Q8NGZ9 312 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 FAM210BQ96KR6 192 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 OR2V2Q96R30 315 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 SFXN3Q9BWM7 321 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 SH3BGRL3Q9H299 93 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 FBXL17Q9UF56 701 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 CBY1Q9Y3M2 126 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 GNG10P50151 68 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 STARD6P59095 220 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 CLEC2AQ6UVW9 174 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
ACTN1-216ENST00000556083 TBC1D26Q86UD7 250 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 LRRC3BQ96PB8 259 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 PARP11Q9NR21 331 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 CCL27Q9Y4X3 112 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 WNT1P04628 370 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 IGFBP6P24592 240 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-216ENST00000556083 NPY1RP25929 384 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 IRF3Q14653 427 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 INPP5JQ15735 1006 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-216ENST00000556083 VAMP3Q15836 100 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 FAM27D1Q5T7N8 215 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 TUSC5Q8IXB3 177 aa9.41□□□□□ -0.9
ACTN1-216ENST00000556083 F5H697 171 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 M0QZK8 103 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 GGCTO75223 188 aaKnown RBP9.4□□□□□ -0.9
ACTN1-216ENST00000556083 ROM1Q03395 351 aa9.4□□□□□ -0.9
ACTN1-216ENST00000556083 FAAP20Q6NZ36 180 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms