RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 FAM122BQ7Z309 247 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 TPRX1Q8N7U7 411 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 C14orf79Q96F83 325 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 PLXNB2O15031 1838 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 ATP6V1G2-DDX39BF2Z307 99 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 WISP3O95389 354 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-220ENST00000555612 C21orf58P58505 322 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 FABP9Q0Z7S8 132 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 PIGYQ3MUY2 71 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 SLC16A12Q6ZSM3 486 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 BAP18Q8IXM2 172 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 C11orf42Q8N5U0 333 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 OR5A2Q8NGI9 324 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 PARP11Q9NR21 331 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 CENPVL1A0A0U1RR11 272 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 VDAC1P21796 283 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 LOXL3P58215 753 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 PAFAH1B2P68402 229 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 CD300LDQ6UXZ3 194 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 FAM181AQ8N9Y4 354 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 OR4D10Q8NGI6 311 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 RBPMSQ93062 196 aaKnown RBP7.19□□□□□ -1.26
SYNE2-220ENST00000555612 WDFY2Q96P53 400 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 SLC45A2Q9UMX9 530 aa7.19□□□□□ -1.26
SYNE2-220ENST00000555612 A0A1W2PR77 199 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 OR2C1O95371 312 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 PGA3P0DJD8 388 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 PRDX2P32119 198 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 LTBRP36941 435 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 NCR3LG1Q68D85 454 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 RAB40CQ96S21 281 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 LPAR3Q9UBY5 353 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 PILRAQ9UKJ1 303 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 STARD10Q9Y365 291 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 IGHV3OR16-10A0A075B7F0 116 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 IGKV1-8A0A0C4DH67 115 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 TFPI2P48307 235 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 BAK1Q16611 211 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 DYRK2Q92630 601 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 ZNF714Q96N38 554 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 ASCL3Q9NQ33 180 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 FAM24AA6NFZ4 105 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 G3V3Q6 166 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 RGS13O14921 159 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 GREM1O60565 184 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 PF4V1P10720 104 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 SLC35B1P78383 322 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 LY6EQ16553 131 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 SHISA5Q8N114 240 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 ABHD17AQ96GS6 310 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 GAR1Q9NY12 217 aaKnown RBP7.18□□□□□ -1.26
SYNE2-220ENST00000555612 DNAJC13O75165 2243 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 IGHV3-72A0A0B4J1Y9 119 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 SOCS1O15524 211 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 CLDN14O95500 239 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 SFT2D2O95562 160 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 NAT2P11245 290 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 HMGA2P52926 109 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 GFRA1P56159 465 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 PSG4Q00888 419 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 RBPMS2Q6ZRY4 209 aaKnown RBP7.18□□□□□ -1.26
SYNE2-220ENST00000555612 TBC1D26Q86UD7 250 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 SLIRPQ9GZT3 109 aaKnown RBP7.18□□□□□ -1.26
SYNE2-220ENST00000555612 TXNDC12O95881 172 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 S100A8P05109 93 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 CTSBP07858 339 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 PPP1R1AQ13522 171 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 PDZD11Q5EBL8 140 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 OR5C1Q8NGR4 320 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 LILRB1Q8NHL6 650 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-220ENST00000555612 FRRS1LQ9P0K9 344 aa7.18□□□□□ -1.26
SYNE2-220ENST00000555612 ADAM10O14672 748 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 TIAF1O95411 115 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 TPPP2P59282 170 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 TEX30Q5JUR7 227 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 GGNBP1Q5YKI7 109 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 ZNF705AQ6ZN79 300 aaPredicted RBP7.17□□□□□ -1.26
SYNE2-220ENST00000555612 ZDHHC22Q8N966 263 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 DUSP18Q8NEJ0 188 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 ZNF596Q8TC21 504 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 Q8WTZ3 238 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 TCEAL7Q9BRU2 100 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 SCN4AP35499 1836 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 A0A1W2PPQ1 181 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 PDLIM4P50479 330 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 OR8I2Q8N0Y5 310 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 ZNF519Q8TB69 540 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 CABLES2Q9BTV7 478 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 PIPOXQ9P0Z9 390 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 VSIG4Q9Y279 399 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 CACNA1CQ13936 2221 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 TRBV5-3A0A0A0MS03 114 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 PPP1R2P9O14990 202 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 C1QBP02746 253 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 INHBBP09529 407 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 ACP1P24666 158 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 PPP1CCP36873 323 aaKnown RBP7.17□□□□□ -1.26
SYNE2-220ENST00000555612 KIAA0141Q14154 515 aaPredicted RBP7.17□□□□□ -1.26
SYNE2-220ENST00000555612 GABRA6Q16445 453 aa7.17□□□□□ -1.26
SYNE2-220ENST00000555612 PERPQ96FX8 193 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms