RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 RELBQ01201 579 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 MLLT11Q13015 90 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-219ENST00000555563 GPR50Q13585 617 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 TBCEQ15813 527 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-219ENST00000555563 ZNF626Q68DY1 528 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 AWAT2Q6E213 333 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 GLIPR1L1Q6UWM5 242 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 UNQ9370/PRO34162Q6UXP9 181 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 LHFPL4Q7Z7J7 247 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 CDH26Q8IXH8 852 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 OR11H6Q8NGC7 330 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 OR4D6Q8NGJ1 314 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 TMEM203Q969S6 136 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 TMEM133Q9H2Q1 129 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 GAL3ST2Q9H3Q3 398 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 ISYNA1Q9NPH2 558 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 TAS2R3Q9NYW6 316 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 C1RLQ9NZP8 487 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 KIF25Q9UIL4 384 aa11.14□□□□□ -0.63
SHMT2-219ENST00000555563 RRP15Q9Y3B9 282 aaKnown RBP11.14□□□□□ -0.63
SHMT2-219ENST00000555563 IGHV2-26A0A0B4J1V2 119 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 FAM90A8PA6NJQ4 464 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 H3BUX3 64 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 GEMIN2O14893 280 aaKnown RBP11.13□□□□□ -0.63
SHMT2-219ENST00000555563 CRYBA1P05813 215 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 GTF2F2P13984 249 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 MDKP21741 143 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-219ENST00000555563 GDNFP39905 211 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 GLP1RP43220 463 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 LGALS4P56470 323 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 RPL15P61313 204 aaKnown RBP11.13□□□□□ -0.63
SHMT2-219ENST00000555563 RPS25P62851 125 aaKnown RBP11.13□□□□□ -0.63
SHMT2-219ENST00000555563 DYNC1I2Q13409 638 aaKnown RBP11.13□□□□□ -0.63
SHMT2-219ENST00000555563 TPBGQ13641 420 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 GPR176Q14439 515 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 LDLRAD2Q5SZI1 272 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 RSBN1Q5VWQ0 802 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-219ENST00000555563 BAIAP2L2Q6UXY1 529 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 CEACAM19Q7Z692 300 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 LINC00596Q86U02 117 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 LRRTM1Q86UE6 522 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 SUMF2Q8NBJ7 301 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 OR5R1Q8NH85 324 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 PLPPR1Q8TBJ4 325 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 CORO2AQ92828 525 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 SSX3Q99909 188 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 UQCC2Q9BRT2 126 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 DPCDQ9BVM2 203 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-219ENST00000555563 IFT22Q9H7X7 185 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 TCF7L1Q9HCS4 588 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 OR6C3Q9NZP0 311 aa11.13□□□□□ -0.63
SHMT2-219ENST00000555563 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
SHMT2-219ENST00000555563 MEIKINA0A087WXM9 373 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 UCHL1P09936 223 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 CPEP16870 476 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 CDK2P24941 298 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 KCNJ3P48549 501 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 RAG2P55895 527 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 GABARAPL2P60520 117 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 PAX5Q02548 391 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 MPV17LQ2QL34 196 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 LRRC75BQ2VPJ9 315 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 HSD17B12Q53GQ0 312 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 HEPN1Q6WQI6 88 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 ZNF367Q7RTV3 350 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 DYNAPQ8N1N2 210 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 TMEM104Q8NE00 496 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 OR13A1Q8NGR1 328 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 PHYHIPQ92561 330 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 FOXRED1Q96CU9 486 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-219ENST00000555563 MGLLQ99685 303 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 MEGF9Q9H1U4 602 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 BANF2Q9H503 90 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 Q9H521 79 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 PCDHB16Q9NRJ7 776 aa11.12□□□□□ -0.63
SHMT2-219ENST00000555563 MEGF11A6BM72 1044 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 FAM172BPA6NC97 362 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 ZNF729A6NN14 1252 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-219ENST00000555563 DENRO43583 198 aaKnown RBP11.11□□□□□ -0.63
SHMT2-219ENST00000555563 NDUFA7O95182 113 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 MGMTP16455 207 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 C17orf58Q2M2W7 97 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 PLA1AQ53H76 456 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 ATAD3CQ5T2N8 411 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 DHRS7BQ6IAN0 325 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-219ENST00000555563 TMEM91Q6ZNR0 172 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 GDPGP1Q6ZNW5 385 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 OR4F5Q8NH21 305 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 MRPS24Q96EL2 167 aaKnown RBP11.11□□□□□ -0.63
SHMT2-219ENST00000555563 BARHL1Q9BZE3 327 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 NCOR1P1Q9H4R4 102 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 ACOT13Q9NPJ3 140 aa11.11□□□□□ -0.63
SHMT2-219ENST00000555563 TRAV39A0A0B4J263 110 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 KBTBD11-OT1A0A1B0GTJ5 212 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 CRTAPO75718 401 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-219ENST00000555563 CGB3P0DN86 165 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 CGB7P0DN87 165 aa11.1□□□□□ -0.63
SHMT2-219ENST00000555563 SRMP19623 302 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms