RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 NEK7Q8TDX7 302 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 DACT3Q96B18 629 aaPredicted RBP11.81□□□□□ -0.52
CHD8-208ENST00000555301 DGCR14Q96DF8 476 aaKnown RBP11.81□□□□□ -0.52
CHD8-208ENST00000555301 ATG5Q9H1Y0 275 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 NCOR1P1Q9H4R4 102 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 MMP26Q9NRE1 261 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 PLEKHJ1Q9NW61 149 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 RHBDL2Q9NX52 303 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 CCDC59Q9P031 241 aaKnown RBP11.81□□□□□ -0.52
CHD8-208ENST00000555301 KCNS2Q9ULS6 477 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 HSF4Q9ULV5 492 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 INSIG2Q9Y5U4 225 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 CREBBPQ92793 2442 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 ITPR3Q14573 2671 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 A0A1W2PQ09 198 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 hADV38S2A0JD32 116 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 J3QLI3 93 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 SOCS1O15524 211 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 AESQ08117 197 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 ARL6IP1Q15041 203 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 Q6ZTK2 550 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 FAM185AQ8N0U4 392 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 OR10R2Q8NGX6 335 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 PHF21AQ96BD5 680 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 CMTM3Q96MX0 182 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 C19orf12Q9NSK7 152 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 ETAA1Q9NY74 926 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 COMMD3Q9UBI1 195 aa11.8□□□□□ -0.52
CHD8-208ENST00000555301 A0A0A6YYH2 397 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 TMEM30CPA0ZSE6 113 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 ODAMA1E959 279 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 A6NJ64 397 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 FOXI3A8MTJ6 420 aaPredicted RBP11.79□□□□□ -0.52
CHD8-208ENST00000555301 RAB27BO00194 218 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 LY6G6DO95868 133 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 TMEM50BP56557 158 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 UBE2NLQ5JXB2 153 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 RSBN1Q5VWQ0 802 aaPredicted RBP11.79□□□□□ -0.52
CHD8-208ENST00000555301 SLC35E4Q6ICL7 350 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 FAHD2BQ6P2I3 314 aaPredicted RBP11.79□□□□□ -0.52
CHD8-208ENST00000555301 BRICD5Q6PL45 260 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 C6orf201Q7Z4U5 140 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 CMTM4Q8IZR5 234 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 TPRX1Q8N7U7 411 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 SAMD12Q8N8I0 201 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 SLC25A38Q96DW6 304 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 RAB3CQ96E17 227 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 FAHD2AQ96GK7 314 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 COQ2Q96H96 371 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 SMR3AQ99954 134 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 ABCG5Q9H222 651 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 OR6C3Q9NZP0 311 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 LINC00312Q9Y6C7 94 aa11.79□□□□□ -0.52
CHD8-208ENST00000555301 MEIKINA0A087WXM9 373 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 TRGV10A0A0A0MS01 117 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 UBE2QL1A1L167 161 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 A8MV72 311 aaPredicted RBP11.78□□□□□ -0.52
CHD8-208ENST00000555301 GLIPR1P48060 266 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 PAX8Q06710 450 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 MOGAT2Q3SYC2 334 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 TMEM200BQ69YZ2 307 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 ZNF497Q6ZNH5 498 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 KIR3DL3Q8N743 410 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 ZNF565Q8N9K5 539 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 PLPPR1Q8TBJ4 325 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 S100A16Q96FQ6 103 aaKnown RBP11.78□□□□□ -0.52
CHD8-208ENST00000555301 ARHGAP5-AS1Q96IT6 56 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 SULT4A1Q9BR01 284 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 FAAP24Q9BTP7 215 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 C7orf69Q9H7B7 122 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 DIABLOQ9NR28 239 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 BATF3Q9NR55 127 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 YAE1D1Q9NRH1 226 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 ING3Q9NXR8 418 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 UBE2J1Q9Y385 318 aaPredicted RBP11.78□□□□□ -0.52
CHD8-208ENST00000555301 KPTNQ9Y664 436 aa11.78□□□□□ -0.52
CHD8-208ENST00000555301 MAP1AP78559 2803 aaPredicted RBP11.77□□□□□ -0.53
CHD8-208ENST00000555301 hCG_1809904A0A1W2PP81 198 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 A0A1W2PPE2 198 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 A0A1W2PR64 198 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 A0A1W2PRV1 198 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 SERPINE3A8MV23 424 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 M0R1W7 72 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 APOA1P02647 267 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 HIST1H1DP16402 221 aaKnown RBP11.77□□□□□ -0.53
CHD8-208ENST00000555301 PLAC9Q5JTB6 97 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 METTL11BQ5VVY1 283 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 C1orf122Q6ZSJ8 110 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 TRAPPC6BQ86SZ2 158 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 GAPTQ8N292 157 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 TEX29Q8N6K0 151 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 CORO2AQ92828 525 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 ZNF714Q96N38 554 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 PECRQ9BY49 303 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 TMPRSS13Q9BYE2 586 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 RIMS4Q9H426 269 aaPredicted RBP11.77□□□□□ -0.53
CHD8-208ENST00000555301 TMEM160Q9NX00 188 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 TAS2R3Q9NYW6 316 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms