RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	MOB4	Q9Y3A3	225 aa		4.05	□□□□□ -1.76
PSMC6-208	ENST00000554956	MED31	Q9Y3C7	131 aa		4.05	□□□□□ -1.76
PSMC6-208	ENST00000554956	PKD1L1	Q8TDX9	2849 aa		4.05	□□□□□ -1.76
PSMC6-208	ENST00000554956	TRAV40	A0A0B4J280	105 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	IGHV2-70D	A0A0C4DH43	119 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956		A0A0G2JND7	137 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	LOC100653049	A0A140TA62	436 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	KIR2DS1	A0A191URI9	304 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	MPTX1	A8MV57	137 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956		F5H5P2	479 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956		H3BSA7	217 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	EDF1	O60869	148 aa	Known RBP	4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	ENTPD5	O75356	428 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	KRT34	O76011	436 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	HLA-DPB1	P04440	258 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	COX5B	P10606	129 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	PSKH1	P11801	424 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	MSR1	P21757	451 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	FCGR2B	P31994	310 aa	Predicted RBP	4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	KDELR2	P33947	212 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	MDH2	P40926	338 aa	Known RBP	4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	HTR5A	P47898	357 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	CYCS	P99999	105 aa	Known RBP	4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	PRB3	Q04118	309 aa	Predicted RBP	4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	PRKCD	Q05655	676 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	MAB21L1	Q13394	359 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	MPPED2	Q15777	294 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	MOGAT2	Q3SYC2	334 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	NCR3LG1	Q68D85	454 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	ZNF343	Q6P1L6	599 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	C16orf87	Q6PH81	154 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956		Q6ZVQ6	151 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	FAM122B	Q7Z309	247 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	PARP8	Q8N3A8	854 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	FGFRL1	Q8N441	504 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	SPIC	Q8N5J4	248 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	TEX29	Q8N6K0	151 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	OR8J3	Q8NGG0	315 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	TMIGD2	Q96BF3	282 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	RASD2	Q96D21	266 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	TPD52L3	Q96J77	140 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	ATP6V1G3	Q96LB4	118 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	C2orf48	Q96LS8	159 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	PRRC1	Q96M27	445 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	RBP7	Q96R05	134 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	OVOL2	Q9BRP0	275 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	SYT4	Q9H2B2	425 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	ELOVL3	Q9HB03	270 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	RPS10P5	Q9NQ39	176 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	CMTM6	Q9NX76	183 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	PTTG3P	Q9NZH4	202 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	ERVK-18	Q9QC07	812 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	CTSZ	Q9UBR2	303 aa		4.04	□□□□□ -1.76
PSMC6-208	ENST00000554956	PRSS37	A4D1T9	235 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956		A6NIZ1	184 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	SRRM4	A7MD48	611 aa	Known RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	C12orf71	A8MTZ7	269 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	EFCAB9	A8MZ26	197 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	MRAS	O14807	208 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	SGCE	O43556	437 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	SLC16A7	O60669	478 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	CD14	P08571	375 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	RPA2	P15927	270 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	GSTM3	P21266	225 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	GLRA1	P23415	457 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	GATA2	P23769	480 aa	Predicted RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	GPR183	P32249	361 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	ARHGDIA	P52565	204 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	DLX1	P56177	255 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	RAP1B	P61224	184 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	FGF12	P61328	243 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	PCBD1	P61457	104 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	RAP1A	P62834	184 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	SELENOW	P63302	87 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	HIST1H3A	P68431	136 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	ST3GAL3	Q11203	375 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	CYLC2	Q14093	348 aa	Predicted RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	TCTEX1D4	Q5JR98	221 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	CLEC12A	Q5QGZ9	265 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	HIST2H3PS2	Q5TEC6	136 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	PRAMEF6	Q5VXH4	476 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	WDR25	Q64LD2	544 aa	Predicted RBP	4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	ASPHD2	Q6ICH7	369 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	FBXW12	Q6X9E4	464 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	HIST2H3A	Q71DI3	136 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	HDDC2	Q7Z4H3	204 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	OAF	Q86UD1	273 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	OFCC1	Q8IZS5	231 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	FAM86B1	Q8N7N1	296 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	CCDC197	Q8NCU1	140 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	BHLHE23	Q8NDY6	225 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	OR8G5	Q8NG78	346 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	OR1F12	Q8NHA8	337 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	SLC7A13	Q8TCU3	470 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	RASSF5	Q8WWW0	418 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	MAGEB18	Q96M61	343 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	TBX15	Q96SF7	602 aa		4.03	□□□□□ -1.76
PSMC6-208	ENST00000554956	ECSIT	Q9BQ95	431 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms