RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SMCO4Q9NRQ5 59 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 C19orf12Q9NSK7 152 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 MED29Q9NX70 200 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 KIR2DL5BA0A0G2JN68 375 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 KIR2DL5BA0A0G2JPC4 375 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF729A6NN14 1252 aaPredicted RBP2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ATP6V1G2-DDX39BF2Z307 99 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 F8W036 122 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 AQP7O14520 342 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 CCSO14618 274 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ZG16O60844 167 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ADAP1O75689 374 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 SCO1O75880 301 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 CRYGBP07316 175 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 DBHP09172 617 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 VDAC1P21796 283 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 GABRR1P24046 479 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ARR3P36575 388 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 STARP49675 285 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 SSR4P51571 173 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 RAB14P61106 215 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 NKX6-1P78426 367 aaPredicted RBP2.9□□□□□ -1.95
SEC23A-207ENST00000554615 NSDHLQ15738 373 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 RPL7L1Q6DKI1 246 aaKnown RBP2.9□□□□□ -1.95
SEC23A-207ENST00000554615 C20orf204Q6ZNR8 217 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 TTLL10Q6ZVT0 673 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 KIR2DL5AQ8N109 375 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 TSTD1Q8NFU3 115 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 OR52M1Q8NGK5 317 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 TSEN15Q8WW01 171 aaKnown RBP2.9□□□□□ -1.95
SEC23A-207ENST00000554615 REEP6Q96HR9 211 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 RAB40CQ96S21 281 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 NIPSNAP3BQ9BS92 247 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 NRSN2Q9GZP1 204 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 SLC35B3Q9H1N7 401 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 TAF9BQ9HBM6 251 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 C12orf4Q9NQ89 552 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 BIN3Q9NQY0 253 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 OCIAD1Q9NX40 245 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF581Q9P0T4 197 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 MEMO1Q9Y316 297 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 PRR14LQ5THK1 2151 aa2.9□□□□□ -1.95
SEC23A-207ENST00000554615 NSG1A0A0A6YYJ2 146 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 A0A0G2JMM0 328 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 C3orf85A0A1B0GTC6 90 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 A0A1W2PPB8 328 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 A0A1W2PRS3 328 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 C17orf98A8MV24 154 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 KIR3DP1A8MWS1 328 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 B4DGG1 531 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 RAB29O14966 203 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 PGLYRP1O75594 196 aaPredicted RBP2.89□□□□□ -1.95
SEC23A-207ENST00000554615 SCRG1O75711 98 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 OR2J2O76002 312 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 PMP2P02689 132 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 SFTPBP07988 381 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF823P16415 610 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 GLRA1P23415 457 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 GNALP38405 381 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 DNASE1L1P49184 302 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 DLX6P56179 175 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 LOXL3P58215 753 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 ARF1P84077 181 aaKnown RBP2.89□□□□□ -1.95
SEC23A-207ENST00000554615 ZXDAP98168 799 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 SAPCD1Q5SSQ6 148 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 GUSBP11Q6P575 273 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF66Q6ZN08 573 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF818PQ6ZRF7 136 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 CALHM1Q8IU99 346 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF101Q8IZC7 436 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 LGI3Q8N145 548 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 Q8N976 141 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 OR5H2Q8NGV7 314 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 SFT2D1Q8WV19 159 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 TMEM170AQ8WVE7 144 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 MBD6Q96DN6 1003 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 GNPNAT1Q96EK6 184 aaPredicted RBP2.89□□□□□ -1.95
SEC23A-207ENST00000554615 GUCD1Q96NT3 240 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 FAM173AQ9BQD7 235 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 PLSCR4Q9NRQ2 329 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 LRFN1Q9P244 771 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 DNAH1Q9P2D7 4330 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 A0A0G2JRQ6 117 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 A0A1W2PP11 408 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 SMCO3A2RU48 225 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 OR5H15A6NDH6 313 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 MBD3L4A6NDZ8 208 aaPredicted RBP2.89□□□□□ -1.95
SEC23A-207ENST00000554615 MBD3L3A6NE82 208 aaPredicted RBP2.89□□□□□ -1.95
SEC23A-207ENST00000554615 MBD3L5A6NJ08 208 aaPredicted RBP2.89□□□□□ -1.95
SEC23A-207ENST00000554615 C9JCJ5 164 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 LGALS8O00214 317 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 GPR31O00270 319 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF737O75373 536 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 EIF3GO75821 320 aaKnown RBP eCLIP2.89□□□□□ -1.95
SEC23A-207ENST00000554615 BRI3O95415 125 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 KNG1P01042 644 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 CRYBA1P05813 215 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 CBR1P16152 277 aa2.89□□□□□ -1.95
SEC23A-207ENST00000554615 CDX1P47902 265 aaPredicted RBP2.89□□□□□ -1.95
SEC23A-207ENST00000554615 RBP2P50120 134 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms