RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ESPL1Q14674 2120 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 CACNA1DQ01668 2161 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 A0A0G2JMP0 313 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 A0A0X1KG70 313 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 LOC101059948A0A1B0GTJ6 334 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 TLCD2A6NGC4 264 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 FAM25AB3EWG3 89 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 FAM25CB3EWG5 89 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 FAM25GB3EWG6 89 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SMLR1H3BR10 107 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 TFECO14948 347 aaPredicted RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SIVA1O15304 175 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 PIN1P1O15428 100 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 LYRM1O43325 122 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 IDH3BO43837 385 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 TSPAN2O60636 221 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 HSBP1O75506 76 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 TXNDC12O95881 172 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 IGKV3-11P04433 115 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 FABP1P07148 127 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 CD3GP09693 182 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 CTXN2P0C2S0 81 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ASAH2BP0C7U1 165 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 PSKH1P11801 424 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SPI1P17947 270 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ATF1P18846 271 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 PMCHP20382 165 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 PYCR1P32322 319 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 DUTP33316 252 aaKnown RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 BTCP35070 178 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SFTPDP35247 375 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 AQP2P41181 271 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SLC25A1P53007 311 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 MLF1P58340 268 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ACTC1P68032 377 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ACTA1P68133 377 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SRYQ05066 204 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SCRN3Q0VDG4 424 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 BIKQ13323 160 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 QPRTQ15274 297 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 FAM189A2Q15884 450 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 IGFBP7Q16270 282 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF74Q16587 644 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SLC36A2Q495M3 483 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ACSF3Q4G176 576 aaPredicted RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 CCDC58Q4VC31 144 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 PAN3Q58A45 887 aaKnown RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 Q5BKY6 102 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SLC35D3Q5M8T2 416 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 RPL22L1Q6P5R6 122 aaKnown RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 WDR74Q6RFH5 385 aaPredicted RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 TIPARPQ7Z3E1 657 aaKnown RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 NFE4Q86UQ8 179 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SPAG16Q8N0X2 631 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 CIARTQ8N365 385 aaPredicted RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 PRSS35Q8N3Z0 413 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 MS4A15Q8N5U1 240 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 C8orf31Q8N9H6 132 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 OR4M2Q8NGB6 313 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 OR1L6Q8NGR2 347 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 OR5H6Q8NGV6 325 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF721Q8TF20 911 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 RGP1Q92546 391 aaPredicted RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 TSLPQ969D9 159 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 UPRTQ96BW1 309 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 SMIM19Q96E16 107 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 Q96M85 177 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 NMNAT3Q96T66 252 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 CNN2Q99439 309 aaKnown RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 S1PR3Q99500 378 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 MARVELD1Q9BSK0 173 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 NUDT9Q9BW91 350 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 NXF5Q9H1B4 397 aaKnown RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 CHST11Q9NPF2 352 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 EXOSC3Q9NQT5 275 aaKnown RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ZC4H2Q9NQZ6 224 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF71Q9NQZ8 489 aaPredicted RBP4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 UBQLN4Q9NRR5 601 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 RPS6KB2Q9UBS0 482 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 PRODH2Q9UF12 536 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 PROCRQ9UNN8 238 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 MEMO1Q9Y316 297 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 MMACHCQ9Y4U1 282 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 UNC79Q9P2D8 2635 aa4.36□□□□□ -1.71
MTHFD1-206ENST00000554353 A0A1W2PNV4 684 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 A0A1W2PRD5 423 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 A0A1W2PRG6 482 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 FAM172BPA6NC97 362 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 A6NIN4 97 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 ARGFXA6NJG6 315 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 CENPXA8MT69 81 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 IDSB3KWA1 339 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 MKRN2OSH3BPM6 223 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 DCTN6O00399 190 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 XRCC2O43543 280 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 GATCO43716 136 aaKnown RBP4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 ICOSLGO75144 302 aa4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 GATBO75879 557 aaKnown RBP4.35□□□□□ -1.71
MTHFD1-206ENST00000554353 STK17BO94768 372 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms