RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 GBX2P52951 348 aaPredicted RBP14.97□□□□□ -0.01
CPSF2-203ENST00000554290 C17orf58Q2M2W7 97 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 ELP2Q6IA86 826 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 CCDC121Q6ZUS5 278 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 C10orf67Q8IYJ2 551 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 OR51T1Q8NGJ9 327 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 OR9G1Q8NH87 305 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 HAVCR2Q8TDQ0 301 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 NR1H4Q96RI1 486 aaPredicted RBP14.97□□□□□ -0.01
CPSF2-203ENST00000554290 BARHL1Q9BZE3 327 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 PPIL3Q9H2H8 161 aaKnown RBP14.97□□□□□ -0.01
CPSF2-203ENST00000554290 NCOR1P1Q9H4R4 102 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 AASSQ9UDR5 926 aa14.97□□□□□ -0.01
CPSF2-203ENST00000554290 AMMECR1Q9Y4X0 333 aaPredicted RBP14.97□□□□□ -0.01
CPSF2-203ENST00000554290 MEIKINA0A087WXM9 373 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 H3BNX3 289 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 PF4P02776 101 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 IGLL1P15814 213 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 GABRB1P18505 474 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 RAB3AP20336 220 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 C21orf33P30042 268 aaPredicted RBP14.96□□□□□ -0.01
CPSF2-203ENST00000554290 GLP1RP43220 463 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 RAB40BQ12829 278 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 PAN3Q58A45 887 aaKnown RBP14.96□□□□□ -0.01
CPSF2-203ENST00000554290 TCTEX1D4Q5JR98 221 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 FOXB2Q5VYV0 432 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 PXT1Q8NFP0 134 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 RHOXF1Q8NHV9 184 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 MYDGFQ969H8 173 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 RPEQ96AT9 228 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 KIRREL1Q96J84 757 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 GPER1Q99527 375 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 PDCD1LG2Q9BQ51 273 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 AURKAIP1Q9NWT8 199 aaPredicted RBP14.96□□□□□ -0.01
CPSF2-203ENST00000554290 ERVK13-1Q9NX77 482 aa14.96□□□□□ -0.01
CPSF2-203ENST00000554290 HSPB6O14558 160 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 CGB3P0DN86 165 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 CGB7P0DN87 165 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 SLC35A2P78381 396 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 KLHL22Q53GT1 634 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 C9orf152Q5JTZ5 239 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 LPCAT4Q643R3 524 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 SATL1Q86VE3 508 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 THNSL2Q86YJ6 484 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 CNIH3Q8TBE1 160 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 TOMM40LQ969M1 308 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 C9orf16Q9BUW7 83 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 AMBNQ9NP70 447 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 CALYQ9NYX4 217 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 KIF25Q9UIL4 384 aa14.95□□□□□ -0.02
CPSF2-203ENST00000554290 NOTCH3Q9UM47 2321 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 E9PI62 339 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 CLIC3O95833 236 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 AMY1AP04745 511 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 AMY2AP04746 511 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 IL13RA2Q14627 380 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 RSU1Q15404 277 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 KHDC1LQ5JSQ8 128 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 TNFAIP8L1Q8WVP5 186 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 IDI2-AS1Q9NZ38 188 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 MOB4Q9Y3A3 225 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 RPL36Q9Y3U8 105 aaKnown RBP14.94□□□□□ -0.02
CPSF2-203ENST00000554290 HSPE1-MOB4S4R3N1 261 aa14.94□□□□□ -0.02
CPSF2-203ENST00000554290 J3QR06 171 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 DUS4LO95620 317 aaKnown RBP14.93□□□□□ -0.02
CPSF2-203ENST00000554290 CD2P06729 351 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 KCNJ3P48549 501 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 MADCAM1Q13477 382 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 ZSCAN26Q16670 478 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 OSR2Q8N2R0 312 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 OR52I1Q8NGK6 324 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 OR13A1Q8NGR1 328 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 ZNF649Q9BS31 505 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 LINC00574Q9H8X3 128 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 MRPS18AQ9NVS2 196 aaKnown RBP14.93□□□□□ -0.02
CPSF2-203ENST00000554290 ZNF281Q9Y2X9 895 aa14.93□□□□□ -0.02
CPSF2-203ENST00000554290 TRAV24A0A0B4J272 114 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A18PA6NE21 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A16PA6NEW6 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A20PA6NIJ5 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 SH2D7A6NKC9 451 aaPredicted RBP14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A9PA6NNJ1 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A12PA8MX19 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A5PA8MXJ8 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 GABRPO00591 440 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 IL1AP01583 271 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A15PP0C7V4 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A13PP0C7W8 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A14PP0C7W9 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM90A24PP0C7X0 464 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 SOX2P48431 317 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 PAX5Q02548 391 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 UTF1Q5T230 341 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 ZNF529Q6P280 563 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 SLC16A12Q6ZSM3 486 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 Q8NFD4 153 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 OR10A7Q8NGE5 316 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 GPR148Q8TDV2 347 aa14.92□□□□□ -0.02
CPSF2-203ENST00000554290 RCC1LQ96I51 464 aaKnown RBP14.92□□□□□ -0.02
CPSF2-203ENST00000554290 FAM192AQ9GZU8 254 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms