RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 IGHV6-1A0A0B4J1U7 121 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 CENPVL3A0A0U1RRI6 287 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 A0A1B0GXF2 115 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 A0A1W2PP18 115 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 PGPA6NDG6 321 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 CLDN24A6NM45 220 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 TRIM49D1C9J1S8 452 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 TMEM238C9JI98 176 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 K7EQS6 105 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 CHST10O43529 356 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 TRAF3IP2O43734 574 aaPredicted RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 IGLV2-23P01705 113 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 HBZP02008 142 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 IGHV4-34P06331 123 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SOD3P08294 240 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 OR4A8P0C604 315 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 OR4E1P0C645 316 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SCGB1C2P0DMR2 95 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 CD79BP40259 229 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 KIR3DL2P43630 455 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 HSPA13P48723 471 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 CDK9P50750 372 aaKnown RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 ZNF136P52737 540 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SNAP25P60880 206 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 RAB2AP61019 212 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 POLR2GP62487 172 aaKnown RBP eCLIP1.56□□□□□ -2.16
SRP54-204ENST00000553923 IGLV3-21P80748 117 aaPredicted RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 HPCAP84074 193 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 GTF2BQ00403 316 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 MEF2CQ06413 473 aaPredicted RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 FMODQ06828 376 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 IRF4Q15306 451 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 ZNF79Q15937 498 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SSX1Q16384 188 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 TMEM241Q24JQ0 296 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 RSPO1Q2MKA7 263 aaPredicted RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 ACSBG2Q5FVE4 666 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 FAM78AQ5JUQ0 283 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SYPL2Q5VXT5 272 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SPATA31B1PQ5VZV4 182 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 TRIQKQ629K1 86 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 ZNF544Q6NX49 715 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 HIST2H3AQ71DI3 136 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SMIM15Q7Z3B0 74 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 C6orf120Q7Z4R8 191 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 NIT1Q86X76 327 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 DOLPP1Q86YN1 238 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 ITPRIPQ8IWB1 547 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 CLDN22Q8N7P3 220 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 TMEM161BQ8NDZ6 487 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 OR1M1Q8NGA1 313 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 OR10G4Q8NGN3 311 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 OR11L1Q8NGX0 322 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 COQ8AQ8NI60 647 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 ENKURQ8TC29 256 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SCGB1C1Q8TD33 95 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 NEK7Q8TDX7 302 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 EEF1AKMT1Q8WVE0 214 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 RASSF5Q8WWW0 418 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SRSF12Q8WXF0 261 aaKnown RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 TMBIM1Q969X1 311 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 RBMXL1Q96E39 390 aaKnown RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 ZNF285Q96NJ3 590 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 PRAP1Q96NZ9 151 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 CAMK2N2Q96S95 79 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 ZNF382Q96SR6 550 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 GGTLC1Q9BX51 225 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 SLC17A9Q9BYT1 436 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 FGF23Q9GZV9 251 aaPredicted RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 TXNIPQ9H3M7 391 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 ASB7Q9H672 318 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 C11orf49Q9H6J7 331 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 NANOGQ9H9S0 305 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 PDFQ9HBH1 243 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 NOX3Q9HBY0 568 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 PARP11Q9NR21 331 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 FKBP14Q9NWM8 211 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 GLTPQ9NZD2 209 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 KLF13Q9Y2Y9 288 aaPredicted RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 HDGFL3Q9Y3E1 203 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 MMACHCQ9Y4U1 282 aa1.56□□□□□ -2.16
SRP54-204ENST00000553923 PHF3Q92576 2039 aaKnown RBP1.56□□□□□ -2.16
SRP54-204ENST00000553923 IGLV11-55A0A075B6I3 123 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 A0A0U1RQV1 116 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 A0A1B0GUA9 196 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 C5orf63A6NC05 138 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 SMIM9A6NGZ8 99 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 EPOPA6NHQ4 379 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 OR5H1A6NKK0 313 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 C11orf94C9JXX5 98 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 C8orf87E5RJ46 101 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 H3BQV1 296 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 M0QYV0 167 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 KPNA3O00505 521 aaPredicted RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 COX7A2P2O60397 106 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 EIF1BO60739 113 aaKnown RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 SS18L1O75177 396 aaPredicted RBP1.55□□□□□ -2.16
SRP54-204ENST00000553923 CNMDO75829 334 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 IL6P05231 212 aa1.55□□□□□ -2.16
SRP54-204ENST00000553923 IL3P08700 152 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms