RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 NINJ1Q92982 152 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 SDSLQ96GA7 329 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 SNX22Q96L94 193 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 OR8B2Q96RD0 313 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 RCC2Q9P258 522 aaKnown RBP8.14□□□□□ -1.11
CHD8-204ENST00000553622 RABL2AQ9UBK7 228 aaPredicted RBP8.14□□□□□ -1.11
CHD8-204ENST00000553622 MIOXQ9UGB7 285 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 HSF4Q9ULV5 492 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 RABL2BQ9UNT1 228 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 KCNK7Q9Y2U2 307 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 MAB21L2Q9Y586 359 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 MED13LQ71F56 2210 aa8.14□□□□□ -1.11
CHD8-204ENST00000553622 IGHV4-30-2A0A087WSY4 118 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 MEIKINA0A087WXM9 373 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 TRAV39A0A0B4J263 110 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 TMEM30CPA0ZSE6 113 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 MEX3AA1L020 520 aaKnown RBP8.13□□□□□ -1.11
CHD8-204ENST00000553622 K7N7A8 449 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 NDUFS8O00217 210 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 DVL1O14640 695 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 MGST3O14880 152 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 ZNF737O75373 536 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 TK1P04183 234 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 LPLP06858 475 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 LMO1P25800 156 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 GIFP27352 417 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 TRIQKQ629K1 86 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 Q8N402 240 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 TPRX1Q8N7U7 411 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 OR5D13Q8NGL4 314 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 OR4K15Q8NH41 348 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 OR52I2Q8NH67 350 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 PLPPR1Q8TBJ4 325 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 MAFIPQ8WZ33 124 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 NEIL1Q96FI4 390 aaPredicted RBP8.13□□□□□ -1.11
CHD8-204ENST00000553622 SOSTQ9BQB4 213 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 ST6GALNAC5Q9BVH7 336 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 SRRQ9GZT4 340 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 DNTTIP1Q9H147 329 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 C12orf4Q9NQ89 552 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 CTSZQ9UBR2 303 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 ZNF230Q9UIE0 474 aaPredicted RBP8.13□□□□□ -1.11
CHD8-204ENST00000553622 TRAPPC2LQ9UL33 140 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 NAV2Q8IVL1 2488 aa8.13□□□□□ -1.11
CHD8-204ENST00000553622 PRRC2AP48634 2157 aaKnown RBP8.12□□□□□ -1.11
CHD8-204ENST00000553622 LINC00854A0A1B0GVQ3 168 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 FUOMA2VDF0 154 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 GABARAPH6UMI1 98 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 SSX5O60225 188 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 GLAP06280 429 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 PTBP1P26599 531 aaKnown RBP eCLIP8.12□□□□□ -1.11
CHD8-204ENST00000553622 GLP1RP43220 463 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 GLIPR1P48060 266 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 KCNJ3P48549 501 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 SEC61A1P61619 476 aaKnown RBP8.12□□□□□ -1.11
CHD8-204ENST00000553622 GNB2P62879 340 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 ESCO2Q56NI9 601 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 ATPAF1Q5TC12 328 aaPredicted RBP8.12□□□□□ -1.11
CHD8-204ENST00000553622 FAM185AQ8N0U4 392 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 LRRC75A-AS1Q8N1F1 130 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 GDPD1Q8N9F7 314 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 CLDND2Q8NHS1 167 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 SMIM4Q8WVI0 70 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 MBD6Q96DN6 1003 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 COQ2Q96H96 371 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 THAP7Q9BT49 309 aaPredicted RBP8.12□□□□□ -1.11
CHD8-204ENST00000553622 SHARPINQ9H0F6 387 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 FAM234AQ9H0X4 552 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 SEBOXQ9HB31 216 aaPredicted RBP8.12□□□□□ -1.11
CHD8-204ENST00000553622 SCPEP1Q9HB40 452 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 PATZ1Q9HBE1 687 aaKnown RBP8.12□□□□□ -1.11
CHD8-204ENST00000553622 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.12□□□□□ -1.11
CHD8-204ENST00000553622 ABCB10Q9NRK6 738 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 KIF25Q9UIL4 384 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 ITGB1BP2Q9UKP3 347 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 BAHCC1Q9P281 2608 aa8.12□□□□□ -1.11
CHD8-204ENST00000553622 ABCA2Q9BZC7 2435 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 UNC79Q9P2D8 2635 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 IGHV4-61A0A0C4DH41 118 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 A0A1W2PQ09 198 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 ODAMA1E959 279 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 H7C1Q1 480 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 SULT1C2O00338 296 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 TNFRSF13BO14836 293 aaPredicted RBP8.11□□□□□ -1.11
CHD8-204ENST00000553622 PHF1O43189 567 aaPredicted RBP8.11□□□□□ -1.11
CHD8-204ENST00000553622 RBBP9O75884 186 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 TPPPO94811 219 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 FSTL3O95633 263 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 HEXAP06865 529 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 MELTFP08582 738 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 FCGR3AP08637 254 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 INHBBP09529 407 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 WNT2P09544 360 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 CD40LGP29965 261 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 GDNFP39905 211 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 CBX5P45973 191 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 PPP5CP53041 499 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 P2RX3P56373 397 aa8.11□□□□□ -1.11
CHD8-204ENST00000553622 MRPS10P82664 201 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms