RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 C8orf82Q6P1X6 216 aaPredicted RBP10.59□□□□□ -0.71
PRPF39-204ENST00000553605 COQ2Q96H96 371 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 ELOVL1Q9BW60 279 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 TOLLIPQ9H0E2 274 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 TPSG1Q9NRR2 321 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 KRT84Q9NSB2 600 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 GTF2A1LQ9UNN4 478 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 GSTK1Q9Y2Q3 226 aa10.59□□□□□ -0.71
PRPF39-204ENST00000553605 G3V318 75 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 BRI3O95415 125 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 CYB5AP00167 134 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 MOSP00540 346 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 CSN2P05814 226 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 CGB3P0DN86 165 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 CGB7P0DN87 165 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 RIDAP52758 137 aaKnown RBP10.58□□□□□ -0.72
PRPF39-204ENST00000553605 GALEQ14376 348 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 Q6ZSR3 168 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 ZNF679Q8IYX0 411 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 ZNF565Q8N9K5 539 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 AQP11Q8NBQ7 271 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 OR8H1Q8NGG4 311 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 MNTQ99583 582 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 RSRP1Q9BUV0 290 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 GORASP2Q9H8Y8 452 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 INTS9Q9NV88 658 aaKnown RBP10.58□□□□□ -0.72
PRPF39-204ENST00000553605 IDI2-AS1Q9NZ38 188 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 ZNF107Q9UII5 783 aaPredicted RBP10.58□□□□□ -0.72
PRPF39-204ENST00000553605 MRPS28Q9Y2Q9 187 aaKnown RBP10.58□□□□□ -0.72
PRPF39-204ENST00000553605 CEPT1Q9Y6K0 416 aa10.58□□□□□ -0.72
PRPF39-204ENST00000553605 A0A1W2PPE3 182 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 FAM90A10PA6NDY2 464 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 LOC110117498-PIK3R3F6TDL0 507 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 TNFRSF11BO00300 401 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 DEDDO75618 318 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 CCNB2O95067 398 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 F2RL1P55085 397 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 ROM1Q03395 351 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 SCN1BQ07699 218 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 LTC4SQ16873 150 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 LINC00322Q6ZN03 302 aaPredicted RBP10.57□□□□□ -0.72
PRPF39-204ENST00000553605 ELMOD2Q8IZ81 293 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 IQCF1Q8N6M8 205 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 BORCS8Q96FH0 119 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 OSBPL10Q9BXB5 764 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 YIPF3Q9GZM5 350 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 PPIL3Q9H2H8 161 aaKnown RBP10.57□□□□□ -0.72
PRPF39-204ENST00000553605 HMG20AQ9NP66 347 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 CALYQ9NYX4 217 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 COPS3Q9UNS2 423 aa10.57□□□□□ -0.72
PRPF39-204ENST00000553605 PRR32B1ATL7 298 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 PRODHO43272 600 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 SRSF10O75494 262 aaKnown RBP10.56□□□□□ -0.72
PRPF39-204ENST00000553605 ZNF44P15621 663 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 CD1BP29016 333 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 ATXN7L3Q14CW9 347 aaPredicted RBP10.56□□□□□ -0.72
PRPF39-204ENST00000553605 BCL2L15Q5TBC7 163 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 SLC16A12Q6ZSM3 486 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 TMEM104Q8NE00 496 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 TEX47Q8TBZ9 253 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 FLYWCH2Q96CP2 140 aaKnown RBP10.56□□□□□ -0.72
PRPF39-204ENST00000553605 TTTY10Q9BZA0 68 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 MOB1AQ9H8S9 216 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 PLEKHA1Q9HB21 404 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 ABCD2Q9UBJ2 740 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 OR52A1Q9UKL2 312 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 IKZF2Q9UKS7 526 aa10.56□□□□□ -0.72
PRPF39-204ENST00000553605 CXorf65A6NEN9 183 aa10.55□□□□□ -0.72
PRPF39-204ENST00000553605 ZNF736B4DX44 427 aaPredicted RBP10.55□□□□□ -0.72
PRPF39-204ENST00000553605 H0Y980 276 aa10.55□□□□□ -0.72
PRPF39-204ENST00000553605 GATBO75879 557 aaKnown RBP10.55□□□□□ -0.72
PRPF39-204ENST00000553605 HSPB1P04792 205 aaKnown RBP10.55□□□□□ -0.72
PRPF39-204ENST00000553605 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
PRPF39-204ENST00000553605 C21orf33P30042 268 aaPredicted RBP10.55□□□□□ -0.72
PRPF39-204ENST00000553605 HTR1FP30939 366 aa10.55□□□□□ -0.72
PRPF39-204ENST00000553605 GLP1RP43220 463 aa10.55□□□□□ -0.72
PRPF39-204ENST00000553605 RPS7P62081 194 aaKnown RBP10.55□□□□□ -0.72
PRPF39-204ENST00000553605 SLC35D3Q5M8T2 416 aa10.55□□□□□ -0.72
PRPF39-204ENST00000553605 RFESDQ8TAC1 157 aa10.55□□□□□ -0.72
PRPF39-204ENST00000553605 ASB17Q8WXJ9 295 aa10.55□□□□□ -0.72
PRPF39-204ENST00000553605 LINC00574Q9H8X3 128 aa10.55□□□□□ -0.72
PRPF39-204ENST00000553605 EFCAB1Q9HAE3 211 aa10.55□□□□□ -0.72
PRPF39-204ENST00000553605 MRM2Q9UI43 246 aaKnown RBP10.55□□□□□ -0.72
PRPF39-204ENST00000553605 TRAV41A0A0B4J266 112 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 NUPR2A6NF83 97 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 NPIPB11E5RHQ5 1161 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 SLC33A1O00400 549 aaPredicted RBP10.54□□□□□ -0.72
PRPF39-204ENST00000553605 ATP6V0E1O15342 81 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 SERPINA3P01011 423 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 IL1AP01583 271 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 SLC2A2P11168 524 aaPredicted RBP10.54□□□□□ -0.72
PRPF39-204ENST00000553605 COX4I1P13073 169 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 RBP2P50120 134 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 ATP1B3P54709 279 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 PPP1R8Q12972 351 aaKnown RBP10.54□□□□□ -0.72
PRPF39-204ENST00000553605 PMS2P11Q13670 270 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 CPOQ8IVL8 374 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 OR13A1Q8NGR1 328 aa10.54□□□□□ -0.72
PRPF39-204ENST00000553605 LRGUKQ96M69 825 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms