RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 GRK1Q15835 563 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 LDLRAD2Q5SZI1 272 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 OR2G6Q5TZ20 316 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 ZNF626Q68DY1 528 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 Q6P435 159 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 ZNF782Q6ZMW2 699 aaPredicted RBP9.49□□□□□ -0.89
SRP54-203ENST00000553544 AHSA2Q719I0 299 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 TPRX1Q8N7U7 411 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 ZNF485Q8NCK3 441 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 OR5AU1Q8NGC0 362 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 OR11H6Q8NGC7 330 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 OR5D18Q8NGL1 313 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 NRG4Q8WWG1 115 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 ZNF714Q96N38 554 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 MND1Q9BWT6 205 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 EXOSC4Q9NPD3 245 aaKnown RBP9.49□□□□□ -0.89
SRP54-203ENST00000553544 GLS2Q9UI32 602 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 PSORS1C1Q9UIG5 152 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 PITPNC1Q9UKF7 332 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 GSTK1Q9Y2Q3 226 aa9.49□□□□□ -0.89
SRP54-203ENST00000553544 RRP15Q9Y3B9 282 aaKnown RBP9.49□□□□□ -0.89
SRP54-203ENST00000553544 SIRT4Q9Y6E7 314 aaPredicted RBP9.49□□□□□ -0.89
SRP54-203ENST00000553544 H3BUI4 141 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 SH2D1BO14796 132 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 MAGEB3O15480 346 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 ALDOBP05062 364 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 HCKP08631 526 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 SNU13P55769 128 aaKnown RBP9.48□□□□□ -0.89
SRP54-203ENST00000553544 WNT4P56705 351 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 BDH1Q02338 343 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 DCTN2Q13561 401 aaKnown RBP9.48□□□□□ -0.89
SRP54-203ENST00000553544 EDDM3AQ14507 147 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 C6orf141Q5SZD1 244 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 RNLSQ5VYX0 342 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 ELP2Q6IA86 826 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 LAIR2Q6ISS4 152 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 LHFPL4Q7Z7J7 247 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 DYNAPQ8N1N2 210 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 Q8NFD4 153 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 PXT1Q8NFP0 134 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 OR13D1Q8NGV5 346 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 GPR148Q8TDV2 347 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 GGHQ92820 318 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 CORO2AQ92828 525 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 SMIM19Q96E16 107 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 ABCB10Q9NRK6 738 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 BABAM2Q9NXR7 383 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 CLEC2DQ9UHP7 191 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 TCF19Q9Y242 345 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 UBE2J1Q9Y385 318 aaPredicted RBP9.48□□□□□ -0.89
SRP54-203ENST00000553544 TBL2Q9Y4P3 447 aaKnown RBP9.48□□□□□ -0.89
SRP54-203ENST00000553544 PCDHGB5Q9Y5G0 923 aa9.48□□□□□ -0.89
SRP54-203ENST00000553544 SIRPB1O00241 398 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 F2RL2O00254 374 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 MMP23AO75900 390 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 LALBAP00709 142 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 PF4P02776 101 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 CSN2P05814 226 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 NHLRC4P0CG21 123 aaPredicted RBP9.47□□□□□ -0.89
SRP54-203ENST00000553544 TMEM225BP0DP42 221 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 RAB3AP20336 220 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
SRP54-203ENST00000553544 SOX2P48431 317 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 P2RX3P56373 397 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 BLCAPP62952 87 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 PPP3R1P63098 170 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 YIF1BQ5BJH7 314 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 DMKNQ6E0U4 476 aaPredicted RBP9.47□□□□□ -0.89
SRP54-203ENST00000553544 ASCL4Q6XD76 172 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 CENPVQ7Z7K6 275 aaPredicted RBP9.47□□□□□ -0.89
SRP54-203ENST00000553544 OR51A2Q8NGJ7 313 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 MALSU1Q96EH3 234 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 ZNF184Q99676 751 aaPredicted RBP9.47□□□□□ -0.89
SRP54-203ENST00000553544 CKLFQ9UBR5 152 aa9.47□□□□□ -0.89
SRP54-203ENST00000553544 TCRBV4S1A1TA0A5B7 111 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 A6NDX4 124 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 SLC33A1O00400 549 aaPredicted RBP9.46□□□□□ -0.9
SRP54-203ENST00000553544 GABRPO00591 440 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 RRP9O43818 475 aaKnown RBP9.46□□□□□ -0.9
SRP54-203ENST00000553544 ARG1P05089 322 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 CDK1P06493 297 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 MAPK3P27361 379 aaPredicted RBP9.46□□□□□ -0.9
SRP54-203ENST00000553544 GLIPR1P48060 266 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 MTNR1BP49286 362 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 EGFEM1PQ0D2K5 195 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 RBM48Q5RL73 367 aaKnown RBP9.46□□□□□ -0.9
SRP54-203ENST00000553544 TMEM219Q86XT9 240 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 CHST4Q8NCG5 386 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 OR51T1Q8NGJ9 327 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 DPF1Q92782 380 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 TMEM106AQ96A25 262 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 GPR61Q9BZJ8 451 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 TMEM133Q9H2Q1 129 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 FKBP14Q9NWM8 211 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 TAS2R4Q9NYW5 299 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 TAS2R3Q9NYW6 316 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 TSSC4Q9Y5U2 329 aaPredicted RBP9.46□□□□□ -0.9
SRP54-203ENST00000553544 SESN1Q9Y6P5 492 aa9.46□□□□□ -0.9
SRP54-203ENST00000553544 IGHV2-26A0A0B4J1V2 119 aa9.45□□□□□ -0.9
SRP54-203ENST00000553544 TRBV5-5A0A0J9YX44 114 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms